RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 I3L4J1 428 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 SPAG6O75602 509 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 PYGBP11216 843 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 BRD2P25440 801 aaKnown RBP12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 CCND2P30279 289 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 GCLCP48506 637 aaPredicted RBP12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 CACNA2D1P54289 1103 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 BASP1P80723 227 aaKnown RBP12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 PRKCEQ02156 737 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 BIRC2Q13490 618 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 MTM1Q13496 603 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 GSTA3Q16772 222 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 C6orf163Q5TEZ5 329 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 GPAT2Q6NUI2 795 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 UNC45BQ8IWX7 931 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 TRIM42Q8IWZ5 723 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 IFT43Q96FT9 208 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 ZBTB45Q96K62 511 aaPredicted RBP12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 FAM161BQ96MY7 647 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 LBHD1Q9BQE6 289 aaPredicted RBP12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 HAPLN2Q9GZV7 340 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 PIDD1Q9HB75 910 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 KCNK4Q9NYG8 393 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 CNTN3Q9P232 1028 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 KIAA1217Q5T5P2 1943 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 FAM237BA0A1B0GVD1 139 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 TCRBV9S1A1TA0A576 114 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 C2orf71A6NGG8 1288 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 COPEO14579 308 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 MAFGO15525 162 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 CIB2O75838 187 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 PIGRP01833 764 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 MMP10P09238 476 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 KDELR1P24390 212 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 ELK3P41970 407 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 YWHAGP61981 247 aaKnown RBP eCLIP12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 SLC25A11Q02978 314 aaKnown RBP12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 SMTNL2Q2TAL5 461 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 MTERF2Q49AM1 385 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 ZBTB41Q5SVQ8 909 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 CYP4A22Q5TCH4 519 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 SMC1BQ8NDV3 1235 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 GATA6Q92908 595 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 NMUR2Q9GZQ4 415 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 ARMCX1Q9P291 453 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 PDP2Q9P2J9 529 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 SLC9A2Q9UBY0 812 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 CNTNAP2Q9UHC6 1331 aa12.35□□□□□ -0.43
VIPAS39-211ENST00000557658 K7ERI5 159 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 MCF2LO15068 1137 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 PLSCR1O15162 318 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 EIF4BP23588 611 aaKnown RBP12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 EIF3EP60228 445 aaKnown RBP12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 EMC2Q15006 297 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 TAZQ16635 292 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 KBTBD12Q3ZCT8 623 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 WDR78Q5VTH9 848 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 SH2D5Q6ZV89 423 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 NET1Q7Z628 596 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 CDAN1Q8IWY9 1227 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 FAM71DQ8N9W8 422 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 DEPTORQ8TB45 409 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 LPAR1Q92633 364 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 FGD4Q96M96 766 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 NR1H4Q96RI1 486 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 TMEM39BQ9GZU3 492 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 ARHGEF4Q9NR80 690 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 KRT82Q9NSB4 513 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 YDJCA8MPS7 323 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 KBTBD13C9JR72 458 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 H3BRJ5 948 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 LRCH4O75427 683 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 ASS1P00966 412 aaKnown RBP12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 POLR2BP30876 1174 aaKnown RBP12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 CDH5P33151 784 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 CPA2P48052 419 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 RAB27AP51159 221 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 AP3M2P53677 418 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 INHBEP58166 350 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 DPYSL3Q14195 570 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 TRMT5Q32P41 509 aaKnown RBP12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 NBPF20Q3BBV1 942 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 SPDYE2Q495Y8 402 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 KCNT1Q5JUK3 1230 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 ATG16L1Q676U5 607 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 ALYREFQ86V81 257 aaKnown RBP12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 VSIG10LQ86VR7 867 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 RFX6Q8HWS3 928 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 IGDCC3Q8IVU1 814 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 SEPT12Q8IYM1 358 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 SRPK1Q96SB4 655 aaKnown RBP12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 TRIM4Q9C037 500 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 WASF2Q9Y6W5 498 aa12.34□□□□□ -0.43
VIPAS39-211ENST00000557658 LTBP4Q8N2S1 1624 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 A0A0B4J269 797 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 LRRIQ4A6NIV6 560 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 H0YIN7 160 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 APOC4-APOC2K7ER74 178 aa12.33□□□□□ -0.43
VIPAS39-211ENST00000557658 APOC2P02655 101 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms