RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 HDCP19113 662 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 CD58P19256 250 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 AVPR2P30518 371 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 MAGEA9P43362 315 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 RAP1GAPP47736 663 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 PSEN1P49768 467 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 MFAP3P55082 362 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 STARD6P59095 220 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 GCNT1Q02742 428 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 NR1H3Q13133 447 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 CCDC183Q5T5S1 534 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 ARHGAP17Q68EM7 881 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 SPOPLQ6IQ16 392 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 ZNF852Q6ZMS4 543 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 GBP6Q6ZN66 633 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 RBM43Q6ZSC3 357 aaKnown RBP8.32□□□□□ -1.08
PSEN1-222ENST00000557356 HFE2Q6ZVN8 426 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 TADA2BQ86TJ2 420 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 FAM35AQ86V20 835 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 DDX42Q86XP3 938 aaKnown RBP eCLIP8.32□□□□□ -1.08
PSEN1-222ENST00000557356 FUKQ8N0W3 1084 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 SIX5Q8N196 739 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 MAB21L3Q8N8X9 362 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 ANKRD20A12PQ8NF67 263 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 ENOX1Q8TC92 643 aaKnown RBP8.32□□□□□ -1.08
PSEN1-222ENST00000557356 SLC2A14Q8TDB8 520 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 SEMA4DQ92854 862 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 TATDN2Q93075 761 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 ZSWIM3Q96MP5 696 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 CDK5RAP1Q96SZ6 601 aaKnown RBP8.32□□□□□ -1.08
PSEN1-222ENST00000557356 SLC46A2Q9BY10 475 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 ZNF518BQ9C0D4 1074 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 SDCBP2Q9H190 292 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 DPEP3Q9H4B8 488 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 C8orf33Q9H7E9 229 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-222ENST00000557356 APOBEC3GQ9HC16 384 aaKnown RBP8.32□□□□□ -1.08
PSEN1-222ENST00000557356 C11orf16Q9NQ32 467 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 ARHGEF3Q9NR81 526 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 TLR8Q9NR97 1041 aaKnown RBP8.32□□□□□ -1.08
PSEN1-222ENST00000557356 HESX1Q9UBX0 185 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 SIT1Q9Y3P8 196 aa8.32□□□□□ -1.08
PSEN1-222ENST00000557356 CLDN5O00501 218 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 SLC9A3R1O14745 358 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-222ENST00000557356 MED7O43513 233 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 ABL1P00519 1130 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 VDRP11473 427 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 TCF3P15923 654 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 EEF1GP26641 437 aaKnown RBP8.31□□□□□ -1.08
PSEN1-222ENST00000557356 GDI1P31150 447 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 GPR15P49685 360 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 TUBP50607 506 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 RAD23BP54727 409 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 FCHO2Q0JRZ9 810 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 TAF10Q12962 218 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 PDGFRLQ15198 375 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 MLF2Q15773 248 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-222ENST00000557356 MAN2A1Q16706 1144 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 SGO2Q562F6 1265 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 SDHAF4Q5VUM1 108 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 SNX30Q5VWJ9 437 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 TXNDC8Q6A555 127 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 VITQ6UXI7 678 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 PAQR9Q6ZVX9 377 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 TMEM150AQ86TG1 271 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 ARHGAP18Q8N392 663 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 PPM1KQ8N3J5 372 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 ZNF276Q8N554 614 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 ANKRD52Q8NB46 1076 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 FLCNQ8NFG4 579 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 WHAMMQ8TF30 809 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 FBXO32Q969P5 355 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 CNOT6LQ96LI5 555 aaKnown RBP8.31□□□□□ -1.08
PSEN1-222ENST00000557356 RPP25Q9BUL9 199 aaKnown RBP8.31□□□□□ -1.08
PSEN1-222ENST00000557356 DUSP16Q9BY84 665 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 TRPC7Q9HCX4 862 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 KRT82Q9NSB4 513 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 IL37Q9NZH6 218 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 PCDHB4Q9Y5E5 795 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 COL6A3P12111 3177 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 NCOR1O75376 2440 aa8.31□□□□□ -1.08
PSEN1-222ENST00000557356 DENND4AQ7Z401 1863 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 C2orf16Q68DN1 1984 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 KANSL1LA0AUZ9 987 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 FAM92AA1XBS5 289 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 ZNF840PA6NDX5 716 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 TNFRSF10BO14763 440 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 NARSO43776 548 aaKnown RBP8.3□□□□□ -1.08
PSEN1-222ENST00000557356 CKMP06732 381 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 RALAP11233 206 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 NPR3P17342 541 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 AOC1P19801 751 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 COL9A1P20849 921 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 FCARP24071 287 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 ADORA2BP29275 332 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 VIPR2P41587 438 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 CDR1P51861 262 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 KPNA1P52294 538 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-222ENST00000557356 SLC5A3P53794 718 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 MAP3K7CLP57077 242 aa8.3□□□□□ -1.08
PSEN1-222ENST00000557356 SNX16P57768 344 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms