RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 LONP2Q86WA8 852 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 ARL14EPQ8N8R7 260 aaPredicted RBP15.11■□□□□ 0.01
SNX6-210ENST00000557341 OSCP1Q8WVF1 389 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 ZNF516Q92618 1163 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 EXOC4Q96A65 974 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 CHFRQ96EP1 664 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 PAGE5Q96GU1 130 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 SPATA32Q96LK8 384 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 SLC22A12Q96S37 553 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 XYLT2Q9H1B5 865 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 DUS2Q9NX74 493 aaKnown RBP15.11■□□□□ 0.01
SNX6-210ENST00000557341 GCNT4Q9P109 453 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 NXF1Q9UBU9 619 aaKnown RBP15.11■□□□□ 0.01
SNX6-210ENST00000557341 USP25Q9UHP3 1055 aa15.11■□□□□ 0.01
SNX6-210ENST00000557341 A0A1B0GVL5 298 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 LRRIQ3A6PVS8 624 aaPredicted RBP15.1■□□□□ 0.01
SNX6-210ENST00000557341 A8MXQ7 604 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 F8VP50 259 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 TRDMT1O14717 391 aaKnown RBP15.1■□□□□ 0.01
SNX6-210ENST00000557341 TCF3P15923 654 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 HDCP19113 662 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 CMA1P23946 247 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 DMWDQ09019 674 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 STK4Q13043 487 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 PUM1Q14671 1186 aaKnown RBP eCLIP15.1■□□□□ 0.01
SNX6-210ENST00000557341 LPAL2Q16609 132 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 KMT5BQ4FZB7 885 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 TDRD10Q5VZ19 366 aaKnown RBP15.1■□□□□ 0.01
SNX6-210ENST00000557341 HEATR6Q6AI08 1181 aaKnown RBP15.1■□□□□ 0.01
SNX6-210ENST00000557341 FSTL4Q6MZW2 842 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 SLC9A9Q8IVB4 645 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 B3GALNT2Q8NCR0 500 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 PLEKHO2Q8TD55 490 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 SH3RF2Q8TEC5 729 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 PARD3BQ8TEW8 1205 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 C8orf48Q96LL4 319 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 CYP2S1Q96SQ9 504 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 TTLL2Q9BWV7 592 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 DPEP3Q9H4B8 488 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 ECT2Q9H8V3 914 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 VRTNQ9H8Y1 702 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 TRPM5Q9NZQ8 1165 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 ARHGAP26Q9UNA1 814 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 WNT6Q9Y6F9 365 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 NUP205Q92621 2012 aa15.1■□□□□ 0.01
SNX6-210ENST00000557341 ATG13O75143 517 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 PTPN1P18031 435 aaKnown RBP15.09■□□□□ 0.01
SNX6-210ENST00000557341 DRD1P21728 446 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 HOXA6P31267 233 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 GJA4P35212 333 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 PPP3CCP48454 512 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 USP46P62068 366 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 CLDN10P78369 228 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 LMNB2Q03252 620 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 NCOA4Q13772 614 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 SIM2Q14190 667 aaPredicted RBP15.09■□□□□ 0.01
SNX6-210ENST00000557341 ZNF667Q5HYK9 610 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 DGLUCYQ7Z3D6 616 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.09■□□□□ 0.01
SNX6-210ENST00000557341 TMEM174Q8WUU8 243 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 P2RY13Q9BPV8 354 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 ZNF518BQ9C0D4 1074 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 KCTD10Q9H3F6 313 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 SMYD3Q9H7B4 428 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 C2orf42Q9NWW7 574 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 USP18Q9UMW8 372 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 HPSEQ9Y251 543 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 ATP8B3O60423 1300 aa15.09■□□□□ 0.01
SNX6-210ENST00000557341 PDXKO00764 312 aa15.08■□□□□ 0
SNX6-210ENST00000557341 RNF40O75150 1001 aa15.08■□□□□ 0
SNX6-210ENST00000557341 EGFP01133 1207 aa15.08■□□□□ 0
SNX6-210ENST00000557341 NR3C1P04150 777 aa15.08■□□□□ 0
SNX6-210ENST00000557341 SDHBP21912 280 aa15.08■□□□□ 0
SNX6-210ENST00000557341 SYKP43405 635 aa15.08■□□□□ 0
SNX6-210ENST00000557341 EML3Q32P44 896 aa15.08■□□□□ 0
SNX6-210ENST00000557341 FBXO43Q4G163 708 aa15.08■□□□□ 0
SNX6-210ENST00000557341 PKN3Q6P5Z2 889 aa15.08■□□□□ 0
SNX6-210ENST00000557341 SCARA5Q6ZMJ2 495 aa15.08■□□□□ 0
SNX6-210ENST00000557341 WDR5BQ86VZ2 330 aa15.08■□□□□ 0
SNX6-210ENST00000557341 CCDC47Q96A33 483 aaKnown RBP15.08■□□□□ 0
SNX6-210ENST00000557341 SLITRK1Q96PX8 696 aa15.08■□□□□ 0
SNX6-210ENST00000557341 DMAC2Q9NW81 257 aa15.08■□□□□ 0
SNX6-210ENST00000557341 DLL3Q9NYJ7 618 aa15.08■□□□□ 0
SNX6-210ENST00000557341 LAMA1P25391 3075 aa15.08■□□□□ 0
SNX6-210ENST00000557341 PLXND1Q9Y4D7 1925 aa15.07■□□□□ 0
SNX6-210ENST00000557341 ZNF840PA6NDX5 716 aa15.07■□□□□ 0
SNX6-210ENST00000557341 CLDN5O00501 218 aa15.07■□□□□ 0
SNX6-210ENST00000557341 HRO43593 1189 aa15.07■□□□□ 0
SNX6-210ENST00000557341 LRP3O75074 770 aa15.07■□□□□ 0
SNX6-210ENST00000557341 KIF20AO95235 890 aa15.07■□□□□ 0
SNX6-210ENST00000557341 NFATC1O95644 943 aa15.07■□□□□ 0
SNX6-210ENST00000557341 OLFM2O95897 454 aa15.07■□□□□ 0
SNX6-210ENST00000557341 RETP07949 1114 aa15.07■□□□□ 0
SNX6-210ENST00000557341 P4HA1P13674 534 aa15.07■□□□□ 0
SNX6-210ENST00000557341 RAP1GAPP47736 663 aa15.07■□□□□ 0
SNX6-210ENST00000557341 CACNA2D1P54289 1103 aa15.07■□□□□ 0
SNX6-210ENST00000557341 IFRD2Q12894 506 aaPredicted RBP15.07■□□□□ 0
SNX6-210ENST00000557341 NR1H3Q13133 447 aa15.07■□□□□ 0
SNX6-210ENST00000557341 SRSF5Q13243 272 aaKnown RBP15.07■□□□□ 0
SNX6-210ENST00000557341 RSPO4Q2I0M5 234 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms