RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 PCDHB18PQ96TA0 734 aa18.42■□□□□ 0.54
TUBB3-211ENST00000556536 CSNK1G1Q9HCP0 422 aa18.42■□□□□ 0.54
TUBB3-211ENST00000556536 ARHGAP20Q9P2F6 1191 aa18.42■□□□□ 0.54
TUBB3-211ENST00000556536 HSFX1Q9UBD0 423 aa18.42■□□□□ 0.54
TUBB3-211ENST00000556536 INSL5Q9Y5Q6 135 aa18.42■□□□□ 0.54
TUBB3-211ENST00000556536 MYO7AQ13402 2215 aa18.42■□□□□ 0.54
TUBB3-211ENST00000556536 MYO9BQ13459 2157 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 FAM170AA1A519 330 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 F8VP50 259 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 ATF6P18850 670 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 GPD2P43304 727 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 TUFMP49411 452 aaKnown RBP18.41■□□□□ 0.54
TUBB3-211ENST00000556536 BCAT1P54687 386 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 SKIV2LQ15477 1246 aaKnown RBP18.41■□□□□ 0.54
TUBB3-211ENST00000556536 TSR1Q2NL82 804 aaKnown RBP18.41■□□□□ 0.54
TUBB3-211ENST00000556536 TDRD12Q587J7 1177 aaKnown RBP18.41■□□□□ 0.54
TUBB3-211ENST00000556536 LIN9Q5TKA1 542 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 CCDC149Q6ZUS6 474 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 CCDC186Q7Z3E2 898 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 STKLD1Q8NE28 680 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 C8orf48Q96LL4 319 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 PANX2Q96RD6 677 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 CHP1Q99653 195 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 PDCL3Q9H2J4 239 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 PLEKHA4Q9H4M7 779 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 DMAP1Q9NPF5 467 aaPredicted RBP18.41■□□□□ 0.54
TUBB3-211ENST00000556536 ZNHIT6Q9NWK9 470 aaKnown RBP18.41■□□□□ 0.54
TUBB3-211ENST00000556536 CYTH4Q9UIA0 394 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 HCN4Q9Y3Q4 1203 aa18.41■□□□□ 0.54
TUBB3-211ENST00000556536 HHLA1C9JL84 531 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 RFPL2O75678 378 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 ZMYND10O75800 440 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 KCNQ1P51787 676 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 RPL10AP62906 217 aaKnown RBP18.4■□□□□ 0.54
TUBB3-211ENST00000556536 BST2Q10589 180 aaKnown RBP18.4■□□□□ 0.54
TUBB3-211ENST00000556536 TWF1Q12792 350 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 ADAM15Q13444 863 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 FEZF2Q8TBJ5 459 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 GIPC2Q8TF65 315 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 HDAC7Q8WUI4 952 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 SLC35F5Q8WV83 523 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 PDLIM2Q96JY6 352 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 LHX5Q9H2C1 402 aa18.4■□□□□ 0.54
TUBB3-211ENST00000556536 BZW2Q9Y6E2 419 aaKnown RBP18.4■□□□□ 0.54
TUBB3-211ENST00000556536 DDX3XO00571 662 aaKnown RBP eCLIP18.39■□□□□ 0.532e-8■■□□□ 13.3
TUBB3-211ENST00000556536 TRIM66O15016 1216 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 SETSIPP0DME0 302 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 TNFAIP3P21580 790 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 EIF4A3P38919 411 aaKnown RBP18.39■□□□□ 0.53
TUBB3-211ENST00000556536 ALDH1A3P47895 512 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 RGS7P49802 495 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 PPM1LQ5SGD2 360 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 PMF1Q6P1K2 205 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 TMEM184AQ6ZMB5 413 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 GPRIN1Q7Z2K8 1008 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 PIGZQ86VD9 579 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 C12orf76Q8N812 135 aaPredicted RBP18.39■□□□□ 0.53
TUBB3-211ENST00000556536 C1orf131Q8NDD1 294 aaKnown RBP18.39■□□□□ 0.53
TUBB3-211ENST00000556536 CASP10Q92851 521 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 SEPT11Q9NVA2 429 aaKnown RBP18.39■□□□□ 0.53
TUBB3-211ENST00000556536 PLXNA3P51805 1871 aa18.39■□□□□ 0.53
TUBB3-211ENST00000556536 TCF20Q9UGU0 1960 aaKnown RBP18.39■□□□□ 0.53
TUBB3-211ENST00000556536 GOLGA6L6A8MZA4 724 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 TNFRSF10BO14763 440 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 XPO1O14980 1071 aaKnown RBP18.38■□□□□ 0.53
TUBB3-211ENST00000556536 CCL16O15467 120 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 GABBR2O75899 941 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 CYP1A1P04798 512 aaPredicted RBP18.38■□□□□ 0.53
TUBB3-211ENST00000556536 FECHP22830 423 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 ANXA13P27216 316 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 CDH5P33151 784 aaPredicted RBP18.38■□□□□ 0.53
TUBB3-211ENST00000556536 GSDMDP57764 484 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 CDK17Q00537 523 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 MTMR3Q13615 1198 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 COL19A1Q14993 1142 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 CLEC16AQ2KHT3 1053 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 CTC1Q2NKJ3 1217 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 NAA35Q5VZE5 725 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 CPA5Q8WXQ8 436 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 SPATA17Q96L03 361 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 LRFN3Q9BTN0 628 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 UBXN6Q9BZV1 441 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 CLEC1BQ9P126 229 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 DPP7Q9UHL4 492 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 COG5Q9UP83 839 aa18.38■□□□□ 0.53
TUBB3-211ENST00000556536 PRRC2BQ5JSZ5 2229 aaKnown RBP18.37■□□□□ 0.53
TUBB3-211ENST00000556536 SLC38A8A6NNN8 435 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 LSM8O95777 96 aaKnown RBP18.37■□□□□ 0.53
TUBB3-211ENST00000556536 LRG1P02750 347 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 UNGP13051 313 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-211ENST00000556536 PLA2G4AP47712 749 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 SLC8A3P57103 927 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 USP46P62068 366 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 NOMO3P69849 1222 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 DLX2Q07687 328 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-211ENST00000556536 PDCLQ13371 301 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-211ENST00000556536 ASTE1Q2TB18 679 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-211ENST00000556536 ANKRD54Q6NXT1 300 aa18.37■□□□□ 0.53
TUBB3-211ENST00000556536 TRIM72Q6ZMU5 477 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms