RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CPVLQ9H3G5 476 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 SEMA4AQ9H3S1 761 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 DCTPP1Q9H773 170 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 VAT1LQ9HCJ6 419 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 CATSPERZQ9NTU4 200 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 SPATA6Q9NWH7 488 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-228ENST00000554592 DDX56Q9NY93 547 aaKnown RBP5.57□□□□□ -1.52
ATXN3-228ENST00000554592 ZNF215Q9UL58 517 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-228ENST00000554592 SORCS3Q9UPU3 1222 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 SQORQ9Y6N5 450 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 MCM3APO60318 1980 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 COL4A6Q14031 1691 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 GREB1LQ9C091 1923 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 TTC41PQ6P2S7 1318 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 ZDBF2Q9HCK1 2354 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 MED19A0JLT2 244 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 GCOM1H8Y6P7 765 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 GSTA4O15217 222 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 DHX16O60231 1041 aaKnown RBP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 TADA3O75528 432 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 STAM2O75886 525 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 AMY2AP04746 511 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 RPLP2P05387 115 aaKnown RBP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 POLR2MP0CAP2 368 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 COL6A2P12110 1019 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 AMY2BP19961 511 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 CCND2P30279 289 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 TECP42680 631 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 NT5C2P49902 561 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 SCNN1BP51168 640 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 DSG1Q02413 1049 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 MGAT3Q09327 533 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 PUM1Q14671 1186 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 PGM5Q15124 567 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 CRY1Q16526 586 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 QRICH1Q2TAL8 776 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 FBXO47Q5MNV8 452 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 UTP14CQ5TAP6 766 aaKnown RBP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 VPS53Q5VIR6 699 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 TSHZ3Q63HK5 1081 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 LILRA6Q6PI73 481 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 SYCE2Q6PIF2 218 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 METTL7BQ6UX53 244 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 MFSD6Q6ZSS7 791 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 TSHZ1Q6ZSZ6 1077 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 OTOP3Q7RTS5 596 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 OSTM1Q86WC4 334 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 ADGRG2Q8IZP9 1017 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 SYT8Q8NBV8 401 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 VN1R2Q8NFZ6 395 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 OR2W6PQ8NHA6 318 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 ATL2Q8NHH9 583 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 KCNG4Q8TDN1 519 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 LMBR1Q8WVP7 490 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 RMDN1Q96DB5 314 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 NECTIN4Q96NY8 510 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 GPR20Q99678 358 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 MFSD1Q9H3U5 465 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 EPB41L1Q9H4G0 881 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 RNF41Q9H4P4 317 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 ZCCHC4Q9H5U6 513 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 JMJD4Q9H9V9 463 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 LUC7LQ9NQ29 371 aaKnown RBP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 HELLSQ9NRZ9 838 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 B4GALT6Q9UBX8 382 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 PUF60Q9UHX1 559 aaKnown RBP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 MCM8Q9UJA3 840 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 PMF1-BGLAPU3KQ54 211 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 WDFY4Q6ZS81 3184 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 COL4A4P53420 1690 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-228ENST00000554592 CACNA1HO95180 2353 aa5.56□□□□□ -1.52
ATXN3-228ENST00000554592 CCDC171Q6TFL3 1326 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 A0A1B0GTL3 188 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 OTOL1A6NHN0 477 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-228ENST00000554592 ZNF561-AS1K7EIQ3 104 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 NEMP1O14524 444 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 KRT37O76014 449 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 FGF18O76093 207 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 LMNAP02545 664 aaKnown RBP5.55□□□□□ -1.52
ATXN3-228ENST00000554592 PARP1P09874 1014 aaKnown RBP5.55□□□□□ -1.52
ATXN3-228ENST00000554592 BPIP17213 487 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 CD52P31358 61 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 SLURP1P55000 103 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 JAM2P57087 298 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 ITIH3Q06033 890 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 TRAF1Q13077 416 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 KCNC3Q14003 757 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 PAN2Q504Q3 1202 aaKnown RBP5.55□□□□□ -1.52
ATXN3-228ENST00000554592 ASPRV1Q53RT3 343 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 EMC4Q5J8M3 183 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 SPOUT1Q5T280 376 aaKnown RBP5.55□□□□□ -1.52
ATXN3-228ENST00000554592 CES5AQ6NT32 575 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 LIPIQ6XZB0 460 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 MILR1Q7Z6M3 343 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 ZDHHC14Q8IZN3 488 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 FAM26EQ8N5C1 309 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 CHST14Q8NCH0 376 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 GIMAP8Q8ND71 665 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-228ENST00000554592 PIP4K2CQ8TBX8 421 aa5.55□□□□□ -1.52
ATXN3-228ENST00000554592 DNAJB3Q8WWF6 145 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms