RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 MMP17Q9ULZ9 603 aa8.74□□□□□ -1.01
ACTN1-212ENST00000554158 AGAP1Q9UPQ3 857 aa8.74□□□□□ -1.01
ACTN1-212ENST00000554158 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-212ENST00000554158 NOL4O94818 638 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 ADH1CP00326 375 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 ITGB3P05106 788 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 TMEM191BP0C7N4 346 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 PFKLP17858 780 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 SPINK2P20155 84 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 ACAT1P24752 427 aaKnown RBP8.73□□□□□ -1.01
ACTN1-212ENST00000554158 GRIK1P39086 918 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 TXLNAP40222 546 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 IRX4P78413 519 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 RBP5P82980 135 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 GTF2BQ00403 316 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 USP4Q13107 963 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 ACAP1Q15027 740 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 ZNF77Q15935 545 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 EML3Q32P44 896 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 HSF5Q4G112 596 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-212ENST00000554158 EOGTQ5NDL2 527 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 BTBD8Q5XKL5 378 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 KIAA1211LQ6NV74 962 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 ARMCX6Q7L4S7 300 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 TRMT11Q7Z4G4 463 aaKnown RBP8.73□□□□□ -1.01
ACTN1-212ENST00000554158 RABEPKQ7Z6M1 372 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 TMEM150AQ86TG1 271 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 ADGRF2Q8IZF7 708 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 PDCL2Q8N4E4 241 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 CSGALNACT2Q8N6G5 542 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 KDF1Q8NAX2 398 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-212ENST00000554158 STKLD1Q8NE28 680 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 USP33Q8TEY7 942 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 LARP4BQ92615 738 aaKnown RBP8.73□□□□□ -1.01
ACTN1-212ENST00000554158 RAD54LQ92698 747 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 KCNN1Q92952 543 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 FUBP3Q96I24 572 aaKnown RBP eCLIP8.73□□□□□ -1.01
ACTN1-212ENST00000554158 ANKRD36BP1Q96IX9 119 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 CYP2S1Q96SQ9 504 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 FAM213AQ9BRX8 229 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 MRPL44Q9H9J2 332 aaKnown RBP8.73□□□□□ -1.01
ACTN1-212ENST00000554158 CCDC39Q9UFE4 941 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 GTF3C4Q9UKN8 822 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 ITGA11Q9UKX5 1188 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 SNX9Q9Y5X1 595 aa8.73□□□□□ -1.01
ACTN1-212ENST00000554158 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 PATE3B3GLJ2 98 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 ANKRD63C9JTQ0 380 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 H0Y626 953 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 AP5Z1O43299 807 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 OPHN1O60890 802 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 TRIM16O95361 564 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 KLF8O95600 359 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-212ENST00000554158 TNNC2P02585 160 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 PLCG1P19174 1290 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 LONP1P36776 959 aaKnown RBP8.72□□□□□ -1.01
ACTN1-212ENST00000554158 PPP3CCP48454 512 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 ZNF131P52739 623 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 CYP27A1Q02318 531 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 GFPT1Q06210 699 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-212ENST00000554158 RESTQ13127 1097 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 CRY1Q16526 586 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 CFAP221Q4G0U5 840 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 ZC2HC1CQ53FD0 456 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-212ENST00000554158 LYSMD4Q5XG99 296 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 NAIF1Q69YI7 327 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-212ENST00000554158 SLC39A4Q6P5W5 647 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 DYMQ7RTS9 669 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 DDX42Q86XP3 938 aaKnown RBP eCLIP8.72□□□□□ -1.01
ACTN1-212ENST00000554158 SYT12Q8IV01 421 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 TMEFF1Q8IYR6 380 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 TOP6BLQ8N6T0 577 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 LRRC52Q8N7C0 313 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 MDGA1Q8NFP4 955 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 CEP76Q8TAP6 659 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 HMGB4Q8WW32 186 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 MYRFLQ96LU7 910 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 SLITRK1Q96PX8 696 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 ACCSQ96QU6 501 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 PNKPQ96T60 521 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 GTPBP2Q9BX10 602 aaKnown RBP8.72□□□□□ -1.01
ACTN1-212ENST00000554158 TMLHEQ9NVH6 421 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 RBAKQ9NYW8 714 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-212ENST00000554158 SEL1LQ9UBV2 794 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 EVLQ9UI08 416 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-212ENST00000554158 L1RE1Q9UN81 338 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 ARHGAP26Q9UNA1 814 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 LAMA1P25391 3075 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 IGF2RP11717 2491 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 ADAMTS20P59510 1910 aa8.72□□□□□ -1.01
ACTN1-212ENST00000554158 C2orf78A6NCI8 922 aa8.71□□□□□ -1.02
ACTN1-212ENST00000554158 LEFTY2O00292 366 aa8.71□□□□□ -1.02
ACTN1-212ENST00000554158 TNFRSF10BO14763 440 aa8.71□□□□□ -1.02
ACTN1-212ENST00000554158 PRPF6O94906 941 aaKnown RBP8.71□□□□□ -1.02
ACTN1-212ENST00000554158 GCNT3O95395 438 aa8.71□□□□□ -1.02
ACTN1-212ENST00000554158 SYPP08247 313 aa8.71□□□□□ -1.02
ACTN1-212ENST00000554158 MBL2P11226 248 aaPredicted RBP8.71□□□□□ -1.02
ACTN1-212ENST00000554158 TCF3P15923 654 aa8.71□□□□□ -1.02
ACTN1-212ENST00000554158 GAP43P17677 238 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms