RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 CASP4P49662 377 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 CYP24A1Q07973 514 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 PKP1Q13835 747 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 PDGFRLQ15198 375 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 SNRNP35Q16560 246 aaKnown RBP16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 CC2D1AQ6P1N0 951 aaPredicted RBP16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 CCDC127Q96BQ5 260 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 CGRRF1Q99675 332 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 MAGEC2Q9UBF1 373 aaPredicted RBP16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 SOBPA7XYQ1 873 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 F8VP50 259 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 EIF3DO15371 548 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 LRP3O75074 770 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 PPP6R2O75170 966 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 RPP40O75818 363 aaKnown RBP16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 EPN2O95208 641 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 CHRM1P11229 460 aaPredicted RBP16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 GRIK1P39086 918 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 OPRD1P41143 372 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 RAP1GAPP47736 663 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 IFNAR2P48551 515 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 MYO1EQ12965 1108 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 DUOXA2Q1HG44 320 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 CNNM4Q6P4Q7 775 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 DPH6Q7L8W6 267 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 CPA6Q8N4T0 437 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 NETO1Q8TDF5 533 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 CD101Q93033 1021 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 SPATA17Q96L03 361 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 MMS19Q96T76 1030 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 C7orf25Q9BPX7 421 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 ZNF518BQ9C0D4 1074 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 ARHGAP26Q9UNA1 814 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 SLC8A2Q9UPR5 921 aa16.25■□□□□ 0.19
SNX29P1-201ENST00000548357 LEFTY2O00292 366 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 KIAA0391O15091 583 aaKnown RBP16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 CUTAO60888 179 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 HDCP19113 662 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 MYL6P60660 151 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 CUL4BQ13620 913 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 PSMD6Q15008 389 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 PPM1JQ5JR12 505 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 TCEAL6Q6IPX3 200 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 C4orf50Q6ZRC1 276 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 MYCBPAPQ8TBZ2 947 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 TCEAL3Q969E4 200 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 CHAMP1Q96JM3 812 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 TTLL2Q9BWV7 592 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 B3GNT5Q9BYG0 378 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 SDCBP2Q9H190 292 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 XYLT2Q9H1B5 865 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 SMYD3Q9H7B4 428 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 SLC39A2Q9NP94 309 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 INVSQ9Y283 1065 aa16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 ASCC3Q8N3C0 2202 aaKnown RBP16.24■□□□□ 0.19
SNX29P1-201ENST00000548357 POLR2DO15514 142 aaKnown RBP16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 YEATS4O95619 227 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 HNRNPLP14866 589 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 TCF3P15923 654 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 TNNI1P19237 187 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 DRD1P21728 446 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 SEC13P55735 322 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 IFRD2Q12894 506 aaPredicted RBP16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 PSMD2Q13200 908 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 DMC1Q14565 340 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 KCNB1Q14721 858 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 SURF1Q15526 300 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 VSTM1Q6UX27 236 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 DENND5BQ6ZUT9 1274 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 UNC13DQ70J99 1090 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 C12orf40Q86WS4 652 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 OR6B3Q8NGW1 331 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 ATP2A3Q93084 1043 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 WBP2Q969T9 261 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 SMPD4Q9NXE4 827 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 PCDHA7Q9UN72 937 aa16.23■□□□□ 0.19
SNX29P1-201ENST00000548357 ZNF840PA6NDX5 716 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 K7EQS6 105 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 KLRC4O43908 158 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 TACC1O75410 805 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 OLFM2O95897 454 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 CYP17A1P05093 508 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 ADRB1P08588 477 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 CCDC192P0DO97 292 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 PTPN1P18031 435 aaKnown RBP16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 SDHBP21912 280 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 GNL1P36915 607 aaPredicted RBP16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 AFMP43652 599 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 SLC6A11P48066 632 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 CDH8P55286 799 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 TAF10Q12962 218 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 BMT2Q1RMZ1 405 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 WDR72Q3MJ13 1102 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 PLK5Q496M5 336 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 PLA2G2CQ5R387 149 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 TDRD10Q5VZ19 366 aaKnown RBP16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 SCARA5Q6ZMJ2 495 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 STXBP4Q6ZWJ1 553 aa16.22■□□□□ 0.19
SNX29P1-201ENST00000548357 HS2ST1Q7LGA3 356 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms