RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 RUBCNLQ9H714 662 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 PLAGL2Q9UPG8 496 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 H2AFYO75367 372 aaKnown RBP10.83□□□□□ -0.68
SSH1-203ENST00000546433 RGS4P49798 205 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 ITGA8P53708 1063 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 EFCAB12Q6NXP0 572 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 TPCN2Q8NHX9 752 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 HHIPL1Q96JK4 782 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 CCDC90BQ9GZT6 254 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 OLFML3Q9NRN5 406 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 AFF4Q9UHB7 1163 aaKnown RBP10.83□□□□□ -0.68
SSH1-203ENST00000546433 MAP3K13O43283 966 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 PFKMP08237 780 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 RABGAP1LQ5R372 815 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 LRRC8BQ6P9F7 803 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 METTL7BQ6UX53 244 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 NYAP1Q6ZVC0 841 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 SRLQ86TD4 932 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 TNIP2Q8NFZ5 429 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 SEC16BQ96JE7 1060 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 TASP1Q9H6P5 420 aa10.83□□□□□ -0.68
SSH1-203ENST00000546433 KLRC2P26717 231 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 GEMIN4P57678 1058 aaKnown RBP10.82□□□□□ -0.68
SSH1-203ENST00000546433 CUL2Q13617 745 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 MTFR1Q15390 333 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 USP49Q70CQ1 688 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 TXNRD3Q86VQ6 643 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 TEX9Q8N6V9 391 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 SKA1Q96BD8 255 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 ZSWIM1Q9BR11 485 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 NPHS2Q9NP85 383 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 BATF3Q9NR55 127 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 UBQLN1Q9UMX0 589 aaKnown RBP10.82□□□□□ -0.68
SSH1-203ENST00000546433 ANKRD65E5RJM6 399 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 NCAM2O15394 837 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 PRPF4O43172 522 aaKnown RBP eCLIP10.82□□□□□ -0.68
SSH1-203ENST00000546433 SLC2A3P11169 496 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 TAF6P49848 677 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 UCMAQ8WVF2 138 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 ATXN7L3BQ96GX2 97 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 C9orf72Q96LT7 481 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 TAAR1Q96RJ0 339 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 ZNF518BQ9C0D4 1074 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 PCMTD2Q9NV79 361 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 MSH4O15457 936 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 CST8O60676 142 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 RALBP11234 206 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 KLRC1P26715 233 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 LSP1P33241 339 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 PRKCZQ05513 592 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 MYBPC2Q14324 1141 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 AASDHQ4L235 1098 aaPredicted RBP10.82□□□□□ -0.68
SSH1-203ENST00000546433 DAB2IPQ5VWQ8 1189 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 C3orf62Q6ZUJ4 267 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 TRPM8Q7Z2W7 1104 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 LONP2Q86WA8 852 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 SLC13A5Q86YT5 568 aaPredicted RBP10.82□□□□□ -0.68
SSH1-203ENST00000546433 STX19Q8N4C7 294 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 HPDLQ96IR7 371 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 C20orf96Q9NUD7 363 aaPredicted RBP10.82□□□□□ -0.68
SSH1-203ENST00000546433 RIC8BQ9NVN3 520 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 GID8Q9NWU2 228 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.82□□□□□ -0.68
SSH1-203ENST00000546433 TRIM10Q9UDY6 481 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 BLOC1S6Q9UL45 172 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 CHMP2BQ9UQN3 213 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 A0A0G2JLL6 359 aaPredicted RBP10.82□□□□□ -0.68
SSH1-203ENST00000546433 MAN1A2O60476 641 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 ANXA9O76027 345 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 CCND1P24385 295 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 ATP6V1E1P36543 226 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 GRB10Q13322 594 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 PRRT2Q7Z6L0 340 aaPredicted RBP10.82□□□□□ -0.68
SSH1-203ENST00000546433 ABRAQ8N0Z2 381 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 ZNF558Q96NG5 402 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 ZIM3Q96PE6 472 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 SH3BP1Q9Y3L3 701 aa10.82□□□□□ -0.68
SSH1-203ENST00000546433 GOLGA8RI6L899 631 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 RBP3P10745 1247 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 GARTP22102 1010 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 GNL1P36915 607 aaPredicted RBP10.81□□□□□ -0.68
SSH1-203ENST00000546433 ATXN3P54252 364 aaPredicted RBP10.81□□□□□ -0.68
SSH1-203ENST00000546433 KDSRQ06136 332 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 CNGA3Q16281 694 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 Q4G0T1 1027 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 TMCO5AQ8N6Q1 288 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 AGAP3Q96P47 875 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 TRPC7Q9HCX4 862 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 METTL5Q9NRN9 209 aaKnown RBP10.81□□□□□ -0.68
SSH1-203ENST00000546433 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.81□□□□□ -0.68
SSH1-203ENST00000546433 A0A0A6YYK5 440 aaPredicted RBP10.81□□□□□ -0.68
SSH1-203ENST00000546433 TMEM120BA0PK00 339 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 CLTBP09497 229 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 NAMPTP43490 491 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 PLA2G4AP47712 749 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 ACTN3Q08043 901 aaPredicted RBP10.81□□□□□ -0.68
SSH1-203ENST00000546433 ZC3H12BQ5HYM0 836 aaKnown RBP10.81□□□□□ -0.68
SSH1-203ENST00000546433 DACH2Q96NX9 599 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 CCDC134Q9H6E4 229 aa10.81□□□□□ -0.68
SSH1-203ENST00000546433 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms