RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 GSDMDP57764 484 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 RARS2Q5T160 578 aaKnown RBP10.73□□□□□ -0.69
CPSF7-221ENST00000543545 ANKRD54Q6NXT1 300 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 TRIM72Q6ZMU5 477 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 RTL10Q7L3V2 364 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 CCDC186Q7Z3E2 898 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 ZNF571Q7Z3V5 609 aaPredicted RBP10.73□□□□□ -0.69
CPSF7-221ENST00000543545 ITIH5Q86UX2 942 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 PIGZQ86VD9 579 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 NUP93Q8N1F7 819 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 TC2NQ8N9U0 490 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 C1orf131Q8NDD1 294 aaKnown RBP10.73□□□□□ -0.69
CPSF7-221ENST00000543545 DDX1Q92499 740 aaKnown RBP10.73□□□□□ -0.69
CPSF7-221ENST00000543545 CCDC42Q96M95 316 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 LHX5Q9H2C1 402 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 SFXN1Q9H9B4 322 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 ZDHHC7Q9NXF8 308 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 PCDHGC3Q9UN70 934 aa10.73□□□□□ -0.69
CPSF7-221ENST00000543545 PDCD11Q14690 1871 aaKnown RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 SLC38A8A6NNN8 435 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 TMCO5BA8MYB1 307 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 TULP2O00295 520 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 PIK3R2O00459 728 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 XPO1O14980 1071 aaKnown RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 AKR1B10O60218 316 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 PLEKP08567 350 aaPredicted RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 CSH1P0DML2 217 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 CSH2P0DML3 217 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 LCP1P13796 627 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 HOXB8P17481 243 aaPredicted RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 CHRNB2P17787 502 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 ATF6P18850 670 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 HNRNPH3P31942 346 aaKnown RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 EIF4A3P38919 411 aaKnown RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 GPD2P43304 727 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 NSFP46459 744 aaKnown RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 SNX16P57768 344 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 FMO1Q01740 532 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 MTMR3Q13615 1198 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 CLUL1Q15846 466 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 CYP4A22Q5TCH4 519 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 NAA35Q5VZE5 725 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 CES5AQ6NT32 575 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 PMF1Q6P1K2 205 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 TMEM184AQ6ZMB5 413 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 DENND5BQ6ZUT9 1274 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 DNAJB7Q7Z6W7 309 aaPredicted RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 SIX6OS1Q8N1H7 587 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 MSANTD4Q8NCY6 345 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 STKLD1Q8NE28 680 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 ZMIZ2Q8NF64 920 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 IPO4Q8TEX9 1081 aaKnown RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 SLC35F5Q8WV83 523 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 CPA5Q8WXQ8 436 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 SMG7Q92540 1137 aaKnown RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 PABPC5Q96DU9 382 aaKnown RBP10.72□□□□□ -0.69
CPSF7-221ENST00000543545 SPATA17Q96L03 361 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 PANX2Q96RD6 677 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 PCDHB18PQ96TA0 734 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 CORO1BQ9BR76 489 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 PRKD2Q9BZL6 878 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 UBXN6Q9BZV1 441 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 CSNK1G1Q9HCP0 422 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 EHD2Q9NZN4 543 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 ADAMTS1Q9UHI8 967 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 ASB3Q9Y575 518 aa10.72□□□□□ -0.69
CPSF7-221ENST00000543545 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 NRDCO43847 1150 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 RTN3O95197 1032 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-221ENST00000543545 LSM8O95777 96 aaKnown RBP10.71□□□□□ -0.69
CPSF7-221ENST00000543545 GLP2RO95838 553 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 ABL1P00519 1130 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 MYL4P12829 197 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 PTPN2P17706 415 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 KCNA5P22460 613 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 YWHAQP27348 245 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 HOXA9P31269 272 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 ACADSBP45954 432 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 PLA2G4AP47712 749 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 TKTL1P51854 596 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 SLC5A3P53794 718 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 PDCLQ13371 301 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 KCNC3Q14003 757 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 ARID5BQ14865 1188 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 MEA1Q16626 185 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 CLEC16AQ2KHT3 1053 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 PKDCCQ504Y2 493 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 ATAT1Q5SQI0 421 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 HGSNATQ68CP4 663 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 WDR59Q6PJI9 974 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 CYP26C1Q6V0L0 522 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 ERICH1Q86X53 443 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 WDTC1Q8N5D0 677 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 SCAMP5Q8TAC9 235 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 SLC30A5Q8TAD4 765 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 STK32AQ8WU08 396 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 PSMG2Q969U7 264 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 PPP1R13BQ96KQ4 1090 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 HSFY1Q96LI6 401 aa10.71□□□□□ -0.69
CPSF7-221ENST00000543545 CEP295NLQ96MC4 621 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms