RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 VSTM4Q8IW00 320 aa17.73■□□□□ 0.43
UBC-208ENST00000540700 DCP1BQ8IZD4 617 aaKnown RBP17.73■□□□□ 0.43
UBC-208ENST00000540700 FUKQ8N0W3 1084 aa17.73■□□□□ 0.43
UBC-208ENST00000540700 JAKMIP2Q96AA8 810 aa17.73■□□□□ 0.43
UBC-208ENST00000540700 STK33Q9BYT3 514 aa17.73■□□□□ 0.43
UBC-208ENST00000540700 ZNF518BQ9C0D4 1074 aa17.73■□□□□ 0.43
UBC-208ENST00000540700 SFXN1Q9H9B4 322 aa17.73■□□□□ 0.43
UBC-208ENST00000540700 MAN1C1Q9NR34 630 aa17.73■□□□□ 0.43
UBC-208ENST00000540700 ABI2Q9NYB9 513 aaPredicted RBP17.73■□□□□ 0.43
UBC-208ENST00000540700 SLC27A5Q9Y2P5 690 aa17.73■□□□□ 0.43
UBC-208ENST00000540700 SPTBN2O15020 2390 aa17.73■□□□□ 0.43
UBC-208ENST00000540700 CYP26A1O43174 497 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 CBFA2T2O43439 604 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 RFPL2O75678 378 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 KRT5P13647 590 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 CYP2F1P24903 491 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 BRD2P25440 801 aaKnown RBP17.72■□□□□ 0.43
UBC-208ENST00000540700 YWHAEP62258 255 aaKnown RBP17.72■□□□□ 0.43
UBC-208ENST00000540700 DUSP4Q13115 394 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 PPP1R26Q5T8A7 1209 aaPredicted RBP17.72■□□□□ 0.43
UBC-208ENST00000540700 E4F1Q66K89 784 aaPredicted RBP17.72■□□□□ 0.43
UBC-208ENST00000540700 TPGS2Q68CL5 300 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 FAM71AQ8IYT1 594 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 STKLD1Q8NE28 680 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 SLC2A14Q8TDB8 520 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 TRIM5Q9C035 493 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 FAM124BQ9H5Z6 455 aaPredicted RBP17.72■□□□□ 0.43
UBC-208ENST00000540700 CEP72Q9P209 647 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 GPR179Q6PRD1 2367 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 ITIH6Q6UXX5 1313 aa17.72■□□□□ 0.43
UBC-208ENST00000540700 GYPCP04921 128 aa17.71■□□□□ 0.43
UBC-208ENST00000540700 BDNFP23560 247 aa17.71■□□□□ 0.43
UBC-208ENST00000540700 CYP27A1Q02318 531 aa17.71■□□□□ 0.43
UBC-208ENST00000540700 FAM35AQ86V20 835 aa17.71■□□□□ 0.43
UBC-208ENST00000540700 PPFIBP1Q86W92 1011 aa17.71■□□□□ 0.43
UBC-208ENST00000540700 TTC39CQ8N584 583 aa17.71■□□□□ 0.43
UBC-208ENST00000540700 SLC7A14Q8TBB6 771 aa17.71■□□□□ 0.43
UBC-208ENST00000540700 RSAD2Q8WXG1 361 aa17.71■□□□□ 0.43
UBC-208ENST00000540700 TNIP3Q96KP6 325 aa17.71■□□□□ 0.43
UBC-208ENST00000540700 CYP4F11Q9HBI6 524 aa17.71■□□□□ 0.43
UBC-208ENST00000540700 OTOGLQ3ZCN5 2332 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 BEST1O76090 585 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 C8AP07357 584 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 PAEPP09466 180 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 HAPLN1P10915 354 aaPredicted RBP17.7■□□□□ 0.42
UBC-208ENST00000540700 ATF6P18850 670 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 ADORA2BP29275 332 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 USP8P40818 1118 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 GOLGA8FQ08AF8 430 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 GOLGA8DPQ0D2H9 430 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 NFE2Q16621 373 aaPredicted RBP17.7■□□□□ 0.42
UBC-208ENST00000540700 CFAP221Q4G0U5 840 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 FIGNQ5HY92 759 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 SDHAF4Q5VUM1 108 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 ARHGAP17Q68EM7 881 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 SLC47A2Q86VL8 602 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 TTC30AQ86WT1 665 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 TCEAL8Q8IYN2 117 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 ZMIZ2Q8NF64 920 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 SPPL2BQ8TCT7 592 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 CYFIP2Q96F07 1278 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 FAM81BQ96LP2 452 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 HEXIM2Q96MH2 286 aaKnown RBP17.7■□□□□ 0.42
UBC-208ENST00000540700 CA14Q9ULX7 337 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 YIPF1Q9Y548 306 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 PCDHB5Q9Y5E4 795 aa17.7■□□□□ 0.42
UBC-208ENST00000540700 PTPRDP23468 1912 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 KRBA1A5PL33 1030 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 LRRC53A6NM62 1247 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 O00370 1275 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 GFPT2O94808 682 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 C1RP00736 705 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 VDRP11473 427 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 TRIM21P19474 475 aaKnown RBP17.69■□□□□ 0.42
UBC-208ENST00000540700 GBP2P32456 591 aaPredicted RBP17.69■□□□□ 0.42
UBC-208ENST00000540700 SOX5P35711 763 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 SPATA2LQ8IUW3 424 aaPredicted RBP17.69■□□□□ 0.42
UBC-208ENST00000540700 OLIG1Q8TAK6 271 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 ZNF707Q96C28 371 aaPredicted RBP17.69■□□□□ 0.42
UBC-208ENST00000540700 HNRNPABQ99729 332 aaKnown RBP17.69■□□□□ 0.42
UBC-208ENST00000540700 SMOQ99835 787 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 SEMA4AQ9H3S1 761 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 IGSF9Q9P2J2 1179 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 INSL5Q9Y5Q6 135 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 ACACBO00763 2458 aa17.69■□□□□ 0.42
UBC-208ENST00000540700 TULP2O00295 520 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 NRG2O14511 850 aaPredicted RBP17.68■□□□□ 0.42
UBC-208ENST00000540700 PAPLNO95428 1278 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 CD19P15391 556 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 TWF1Q12792 350 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 TBX2Q13207 712 aaPredicted RBP17.68■□□□□ 0.42
UBC-208ENST00000540700 DDR2Q16832 855 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 MGAT5BQ3V5L5 792 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 PKDCCQ504Y2 493 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 SPECC1LQ69YQ0 1117 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 NOP9Q86U38 636 aaKnown RBP17.68■□□□□ 0.42
UBC-208ENST00000540700 DCLK2Q8N568 766 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 GPR152Q8TDT2 470 aa17.68■□□□□ 0.42
UBC-208ENST00000540700 C2orf15Q8WU43 125 aaKnown RBP17.68■□□□□ 0.42
UBC-208ENST00000540700 DDX1Q92499 740 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms