RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TRPC7Q9HCX4 862 aa11.06□□□□□ -0.64
CDCA3-208ENST00000540683 PRMT8Q9NR22 394 aaPredicted RBP11.06□□□□□ -0.64
CDCA3-208ENST00000540683 F5P12259 2224 aa11.06□□□□□ -0.64
CDCA3-208ENST00000540683 DENND4CQ5VZ89 1909 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 NFATC1O95644 943 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 CST3P01034 146 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-208ENST00000540683 CD72P21854 359 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 PTPRZ1P23471 2315 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-208ENST00000540683 SLC8A3P57103 927 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 MYL6P60660 151 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 PSMC1P62191 440 aaKnown RBP11.05□□□□□ -0.64
CDCA3-208ENST00000540683 DPYDQ12882 1025 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 MTF1Q14872 753 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 ZACNQ401N2 412 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 STXBP5Q5T5C0 1151 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 RIF1Q5UIP0 2472 aaKnown RBP11.05□□□□□ -0.64
CDCA3-208ENST00000540683 TXNDC8Q6A555 127 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 FAM186BQ8IYM0 893 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 GRAMD1CQ8IYS0 662 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 ADSSL1Q8N142 457 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 NUP93Q8N1F7 819 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 PCED1BQ96HM7 432 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 TIGD1Q96MW7 591 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 MED10Q9BTT4 135 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 DMAP1Q9NPF5 467 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-208ENST00000540683 GKN1Q9NS71 199 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 TMLHEQ9NVH6 421 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 DUS2Q9NX74 493 aaKnown RBP11.05□□□□□ -0.64
CDCA3-208ENST00000540683 TBC1D14Q9P2M4 693 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 GMEB2Q9UKD1 530 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 ARHGAP26Q9UNA1 814 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 FAM186AA6NE01 2351 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 NCANO14594 1321 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 PTPRJQ12913 1337 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 PATJQ8NI35 1801 aa11.05□□□□□ -0.64
CDCA3-208ENST00000540683 LRRIQ3A6PVS8 624 aaPredicted RBP11.04□□□□□ -0.64
CDCA3-208ENST00000540683 PRAMEF12O95522 483 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 C4BPAP04003 597 aaKnown RBP11.04□□□□□ -0.64
CDCA3-208ENST00000540683 CHRNB1P11230 501 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 LMO2P25791 158 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 YWHAQP27348 245 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 CASP1P29466 404 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 HOXA6P31267 233 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 TUBP50607 506 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 YWHAEP62258 255 aaKnown RBP11.04□□□□□ -0.64
CDCA3-208ENST00000540683 LRRC63Q05C16 580 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 CETN1Q12798 172 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 MTAPQ13126 283 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 COBLL1Q53SF7 1204 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 WDR44Q5JSH3 913 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 OSTM1Q86WC4 334 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 HOMEZQ8IX15 550 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 ELOA2Q8IYF1 753 aaPredicted RBP11.04□□□□□ -0.64
CDCA3-208ENST00000540683 TMEM130Q8N3G9 435 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 ZBTB44Q8NCP5 570 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 OSCP1Q8WVF1 389 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 USP13Q92995 863 aaPredicted RBP11.04□□□□□ -0.64
CDCA3-208ENST00000540683 ACDQ96AP0 544 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 OTUB2Q96DC9 234 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 CDK5RAP1Q96SZ6 601 aaKnown RBP11.04□□□□□ -0.64
CDCA3-208ENST00000540683 PHOX2BQ99453 314 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 FAM83CQ9BQN1 747 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 MRPL45Q9BRJ2 306 aaKnown RBP11.04□□□□□ -0.64
CDCA3-208ENST00000540683 NACA2Q9H009 215 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 XYLT2Q9H1B5 865 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 CRTAC1Q9NQ79 661 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 NCDNQ9UBB6 729 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 ZDHHC9Q9Y397 364 aa11.04□□□□□ -0.64
CDCA3-208ENST00000540683 MTF2Q9Y483 593 aaPredicted RBP11.04□□□□□ -0.64
CDCA3-208ENST00000540683 FANCMQ8IYD8 2048 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 CACNA1IQ9P0X4 2223 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 CCDC163A0A0D9SF12 145 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 F8VP50 259 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 TRDMT1O14717 391 aaKnown RBP11.03□□□□□ -0.64
CDCA3-208ENST00000540683 PSMA7O14818 248 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 SLC16A3O15427 465 aaKnown RBP11.03□□□□□ -0.64
CDCA3-208ENST00000540683 LRP3O75074 770 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 ASS1P00966 412 aaKnown RBP11.03□□□□□ -0.64
CDCA3-208ENST00000540683 SLC7A9P82251 487 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 FKBP3Q00688 224 aaKnown RBP11.03□□□□□ -0.64
CDCA3-208ENST00000540683 E2F5Q15329 346 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 KRT39Q6A163 491 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 SV2AQ7L0J3 742 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 ASCL5Q7RTU5 278 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 TMEM150AQ86TG1 271 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 CRYBG2Q8N1P7 616 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 CAMKK1Q8N5S9 505 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 NELL1Q92832 810 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 SMARCE1Q969G3 411 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 NT5C1AQ9BXI3 368 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 EPC1Q9H2F5 836 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 TMEM8AQ9HCN3 771 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 PNPLA8Q9NP80 782 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 GTSE1Q9NYZ3 720 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 SLC8A2Q9UPR5 921 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 R4GN57 208 aa11.03□□□□□ -0.64
CDCA3-208ENST00000540683 USP34Q70CQ2 3546 aa11.02□□□□□ -0.64
CDCA3-208ENST00000540683 VPS13AQ96RL7 3174 aa11.02□□□□□ -0.64
CDCA3-208ENST00000540683 ZNF840PA6NDX5 716 aa11.02□□□□□ -0.65
CDCA3-208ENST00000540683 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms