RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 C19orf47Q8N9M1 422 aaKnown RBP4.45□□□□□ -1.7
C2CD3-214ENST00000540057 ADCY4Q8NFM4 1077 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 SEPT1Q8WYJ6 367 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 KLHL6Q8WZ60 621 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 SMG7Q92540 1137 aaKnown RBP4.45□□□□□ -1.7
C2CD3-214ENST00000540057 ZNF707Q96C28 371 aaPredicted RBP4.45□□□□□ -1.7
C2CD3-214ENST00000540057 IGSF21Q96ID5 467 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 NELL2Q99435 816 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 PCYT2Q99447 389 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 SENP7Q9BQF6 1050 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 SCNM1Q9BWG6 230 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 VN1R3Q9BXE9 311 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 AMNQ9BXJ7 453 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 SMARCAD1Q9H4L7 1026 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 JMJD4Q9H9V9 463 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 VAT1LQ9HCJ6 419 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 MAN1C1Q9NR34 630 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 TOMM22Q9NS69 142 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 WHRNQ9P202 907 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 SUSD2Q9UGT4 822 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 FRMPD4Q14CM0 1322 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 IGF2RP11717 2491 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 A0A1W2PQ27 194 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 A0A1W2PQ64 194 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 A0A1W2PQC6 194 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 A0A1W2PQD8 194 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 ZC3H12DA2A288 527 aaKnown RBP4.44□□□□□ -1.7
C2CD3-214ENST00000540057 DHX16O60231 1041 aaKnown RBP4.44□□□□□ -1.7
C2CD3-214ENST00000540057 ZC3H11AO75152 810 aaKnown RBP eCLIP4.44□□□□□ -1.7
C2CD3-214ENST00000540057 EPHX1P07099 455 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 GALTP07902 379 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 ZNF806P0C7X5 589 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 KCNA2P16389 499 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 PFKLP17858 780 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 KLRC1P26715 233 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 L1CAMP32004 1257 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 MC3RP41968 323 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 FNTBP49356 437 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 NOVA1P51513 510 aaKnown RBP4.44□□□□□ -1.7
C2CD3-214ENST00000540057 SLURP1P55000 103 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 PRR5P85299 388 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 NFKB2Q00653 900 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 ADCY1Q08828 1119 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 PPP2R5DQ14738 602 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 EEF1DP3Q658K8 133 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 C19orf48Q6RUI8 117 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 MTHFD1LQ6UB35 978 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 KIAA0319LQ8IZA0 1049 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 ZNF513Q8N8E2 541 aaPredicted RBP4.44□□□□□ -1.7
C2CD3-214ENST00000540057 RNF169Q8NCN4 708 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 FNIP1Q8TF40 1166 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 ARRDC1-AS1Q9H2J1 176 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 NRDE2Q9H7Z3 1164 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 ECHDC1Q9NTX5 307 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 CGGBP1Q9UFW8 167 aaPredicted RBP4.44□□□□□ -1.7
C2CD3-214ENST00000540057 PCDHB10Q9UN67 800 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 EFR3BQ9Y2G0 817 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 SDK1Q7Z5N4 2213 aa4.44□□□□□ -1.7
C2CD3-214ENST00000540057 DSPP15924 2871 aaKnown RBP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 SMG1Q96Q15 3661 aaKnown RBP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 A0A1B0GTL3 188 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 GCOM1H8Y6P7 765 aaPredicted RBP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 SCAMP3O14828 347 aaKnown RBP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 TEX28O15482 410 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 ANP32CO43423 234 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 CAPNS1P04632 268 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 SSBP05455 408 aaKnown RBP eCLIP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 SPATA31D3P0C874 917 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 POLR2MP0CAP2 368 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 CNR2P34972 360 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 CXCL12P48061 93 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 SLC11A1P49279 550 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 CCR3P51677 355 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 CRYBB1P53674 252 aaPredicted RBP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 PFKPQ01813 784 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 SATB1Q01826 763 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 TCEAL1Q15170 157 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 TARBP2Q15633 366 aaKnown RBP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 KIZQ2M2Z5 673 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 COL28A1Q2UY09 1125 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 ASPRV1Q53RT3 343 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 VPS53Q5VIR6 699 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 TSHZ3Q63HK5 1081 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 LIPIQ6XZB0 460 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 ZNF852Q6ZMS4 543 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 SPATA31D4Q6ZUB0 917 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 PROSER1Q86XN7 944 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 DGKHQ86XP1 1220 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 ZNF654Q8IZM8 581 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 ADGRG2Q8IZP9 1017 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 GIMAP8Q8ND71 665 aaPredicted RBP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 MTMR8Q96EF0 704 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 MTA3Q9BTC8 594 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 MRPL9Q9BYD2 267 aaKnown RBP4.43□□□□□ -1.7
C2CD3-214ENST00000540057 RNF38Q9H0F5 515 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 NT5C3AQ9H0P0 336 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 SMOC1Q9H4F8 434 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 RXFP1Q9HBX9 757 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 HEBP1Q9NRV9 189 aa4.43□□□□□ -1.7
C2CD3-214ENST00000540057 MRPL17Q9NRX2 175 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms