RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 MYO3BQ8WXR4 1341 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 ADAMTS7Q9UKP4 1686 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 CCDC195A0A1B0GUA6 201 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 RSPH10B2B2RC85 870 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 GOLGA8SH3BPF8 625 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 GOLGA8MH3BSY2 632 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 RSPH10BP0C881 870 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 SOX5P35711 763 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 IL6STP40189 918 aaPredicted RBP11.15□□□□□ -0.62
RTN3-208ENST00000537981 ALDH1A3P47895 512 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 NDST2P52849 883 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 ARPC4P59998 168 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 VPS72Q15906 364 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 ANKS1BQ7Z6G8 1248 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 PSPC1Q8WXF1 523 aaKnown RBP11.15□□□□□ -0.62
RTN3-208ENST00000537981 ANKRD2Q9GZV1 360 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 BHMT2Q9H2M3 363 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 ANLNQ9NQW6 1124 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 LRRC4BQ9NT99 713 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 DNAJB4Q9UDY4 337 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 PCDHGA3Q9Y5H0 932 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 ARHGAP10A1A4S6 786 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 USP17L12C9JPN9 530 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 USP17L21D6R901 530 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 SCAMP3O14828 347 aaKnown RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 XRCC5P13010 732 aaKnown RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 CDH3P22223 829 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 STIP1P31948 543 aaKnown RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 GRM5P41594 1212 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 NEK2P51955 445 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 ATXN3P54252 364 aaPredicted RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 NSUN2Q08J23 767 aaKnown RBP eCLIP11.14□□□□□ -0.63
RTN3-208ENST00000537981 PRKD1Q15139 912 aaPredicted RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 KCNJ8Q15842 424 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 C6orf163Q5TEZ5 329 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 GSDMBQ8TAX9 411 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 HELQQ8TDG4 1101 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 FAM111AQ96PZ2 611 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 BEGAINQ9BUH8 593 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 C20orf27Q9GZN8 174 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 ZNF287Q9HBT7 754 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 TUBA8Q9NY65 449 aaPredicted RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 DNAJC12Q9UKB3 198 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 CDC14AQ9UNH5 594 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 SMG5Q9UPR3 1016 aaKnown RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 PCDHB13Q9Y5F0 798 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 SPECC1L-ADORA2AF8WAN1 911 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 ENDOUP21128 410 aaKnown RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 PTK6Q13882 451 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 LLGL2Q6P1M3 1020 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 DENND5BQ6ZUT9 1274 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 ADGRG6Q86SQ4 1221 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 C12orf50Q8NA57 414 aaPredicted RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 RAB3IL1Q8TBN0 382 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 GRK7Q8WTQ7 553 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 ELMO3Q96BJ8 720 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 PLEKHA8Q96JA3 519 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 DCLK3Q9C098 648 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 NCKIPSDQ9NZQ3 722 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 LRP2BPQ9P2M1 347 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 MTUS1Q9ULD2 1270 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 MTO1Q9Y2Z2 717 aaKnown RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 CICQ96RK0 1608 aaPredicted RBP11.14□□□□□ -0.63
RTN3-208ENST00000537981 LAMB1P07942 1786 aa11.14□□□□□ -0.63
RTN3-208ENST00000537981 COL5A2P05997 1499 aaPredicted RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 DENRO43583 198 aaKnown RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 CALCAP01258 141 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CALM1P0DP23 149 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CALM2P0DP24 149 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CALM3P0DP25 149 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 TNFAIP3P21580 790 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CNGA3Q16281 694 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CBWD6Q4V339 395 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 HSP90AA5PQ58FG0 334 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CBWD3Q5JTY5 395 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CBWD5Q5RIA9 395 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 DHRS4L2Q6PKH6 230 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 ZFRQ96KR1 1074 aaKnown RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 PCDHB18PQ96TA0 734 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CCDC77Q9BR77 488 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CCDC106Q9BWC9 280 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 FHDC1Q9C0D6 1143 aaPredicted RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 EHD1Q9H4M9 534 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 MAD2L2Q9UI95 211 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 TLL2Q9Y6L7 1015 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 SPATA31A5Q5VU36 1347 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 SPATA31A7Q8IWB4 1347 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 FOXN3O00409 490 aaPredicted RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 LAD1O00515 517 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 SORBS3O60504 671 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 ENTPD3O75355 529 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 ATE1O95260 518 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 PHKG2P15735 406 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 HSPA6P17066 643 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 LMNB1P20700 586 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 GABRB3P28472 473 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 GNA11P29992 359 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 SSTR1P30872 391 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 RFC4P35249 363 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms