RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 V9GYQ6 96 aa11.04□□□□□ -0.64
CLIP1-209ENST00000537178 SALL1Q9NSC2 1324 aa11.04□□□□□ -0.64
CLIP1-209ENST00000537178 HLA-DRAP01903 254 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 THRAP10827 490 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 FDFT1P37268 417 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 NUDT2P50583 147 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 IRAK1P51617 712 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 BARGINQ6ZT62 677 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 LRRC6Q86X45 466 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 SERPINB12Q96P63 405 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 CNPY3Q9BT09 278 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 MOV10L1Q9BXT6 1211 aaKnown RBP11.03□□□□□ -0.64
CLIP1-209ENST00000537178 PRRG3Q9BZD7 231 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 TMEM8AQ9HCN3 771 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 CYP39A1Q9NYL5 469 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 PNMA8BQ9ULN7 279 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-209ENST00000537178 MAPK1P28482 360 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 DCAF6Q58WW2 860 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 C10orf53Q8N6V4 93 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 CELF1Q92879 486 aaKnown RBP11.03□□□□□ -0.64
CLIP1-209ENST00000537178 REEP2Q9BRK0 252 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 RMND5AQ9H871 391 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 PRMT7Q9NVM4 692 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-209ENST00000537178 HPS5Q9UPZ3 1129 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 KIF28PB7ZC32 967 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 TK2O00142 265 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 ZBTB39O15060 712 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 PDE5AO76074 875 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 SLC2A3P11169 496 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 ST13P50502 369 aaKnown RBP11.03□□□□□ -0.64
CLIP1-209ENST00000537178 HMGCS2P54868 508 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 CCZ1BP86790 482 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 CCZ1P86791 482 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-209ENST00000537178 PHKG1Q16816 387 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 MROH9Q5TGP6 573 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 LRRC8DQ7L1W4 858 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 USP38Q8NB14 1042 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 ENGASEQ8NFI3 743 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 OR2W6PQ8NHA6 318 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 JADE3Q92613 823 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 DPF2Q92785 391 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 PKD1L3Q7Z443 1732 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 SNAP23O00161 211 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 PSMD14O00487 310 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 GLRA3O75311 464 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 ITGA4P13612 1032 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 ARMCX4Q5H9R4 360 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 FEZF2Q8TBJ5 459 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 ANKS1AQ92625 1134 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 SEPT5Q99719 369 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-209ENST00000537178 WDR41Q9HAD4 459 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 COL18A1P39060 1754 aa11.03□□□□□ -0.64
CLIP1-209ENST00000537178 GH1P01241 217 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 ZNF23P17027 643 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 FNTAP49354 379 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 ZCWPW2Q504Y3 356 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 C12orf60Q5U649 245 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.64
CLIP1-209ENST00000537178 SEPT12Q8IYM1 358 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 SYNE4Q8N205 404 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 NAT9Q9BTE0 207 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 CARD9Q9H257 536 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 SAC3D1A6NKF1 404 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 GRAP2O75791 330 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 SUPT7LO94864 414 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 IFNA14P01570 189 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 GUCY1A2P33402 732 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 CPA2P48052 419 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 CDC16Q13042 620 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 EMC2Q15006 297 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 GPAT2Q6NUI2 795 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 COL23A1Q86Y22 540 aaPredicted RBP11.02□□□□□ -0.64
CLIP1-209ENST00000537178 MMGT1Q8N4V1 131 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 TERB1Q8NA31 727 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 RAET1EQ8TD07 263 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 ZIM3Q96PE6 472 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 HSD3B7Q9H2F3 369 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 FAM49BQ9NUQ9 324 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 NAGPAQ9UK23 515 aa11.02□□□□□ -0.64
CLIP1-209ENST00000537178 SLIT3O75094 1523 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 A0A1W2PQJ5 194 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 FXR1P51114 621 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLIP1-209ENST00000537178 GEMP55040 296 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 ALDH6A1Q02252 535 aaKnown RBP11.02□□□□□ -0.65
CLIP1-209ENST00000537178 DSG1Q02413 1049 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 ZNF543Q08ER8 600 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 CLEC16AQ2KHT3 1053 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 MGAT5BQ3V5L5 792 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 LRP10Q7Z4F1 713 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 ZCWPW1Q9H0M4 648 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 AGPAT5Q9NUQ2 364 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 SPEF2Q9C093 1822 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 CNOT3O75175 753 aaKnown RBP11.02□□□□□ -0.65
CLIP1-209ENST00000537178 RPS6KA5O75582 802 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 NR3C2P08235 984 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 EPHB2P29323 1055 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 GPC1P35052 558 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 TALDO1P37837 337 aa11.02□□□□□ -0.65
CLIP1-209ENST00000537178 PNPLA4P41247 253 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms