RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 YIPF1Q9Y548 306 aa16.47■□□□□ 0.23
CNN1-202ENST00000535659 INSL5Q9Y5Q6 135 aa16.47■□□□□ 0.23
CNN1-202ENST00000535659 XPO1O14980 1071 aaKnown RBP16.46■□□□□ 0.23
CNN1-202ENST00000535659 PLEKP08567 350 aaPredicted RBP16.46■□□□□ 0.23
CNN1-202ENST00000535659 ANXA13P27216 316 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 EPHB3P54753 998 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 TWF1Q12792 350 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 PLD1Q13393 1074 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 TRIM72Q6ZMU5 477 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 PASD1Q8IV76 773 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 MICALL1Q8N3F8 863 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 TMEM35BQ8NCS4 154 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 SPATA17Q96L03 361 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 PCDHB18PQ96TA0 734 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 CEP83Q9Y592 693 aa16.46■□□□□ 0.23
CNN1-202ENST00000535659 TULP2O00295 520 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 LINC01565O15544 149 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 LSM8O95777 96 aaKnown RBP16.45■□□□□ 0.22
CNN1-202ENST00000535659 LRG1P02750 347 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 CYP1A1P04798 512 aaPredicted RBP16.45■□□□□ 0.22
CNN1-202ENST00000535659 HNRNPA1P09651 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
CNN1-202ENST00000535659 SRGAP2BP0DMP2 458 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 FOSL2P15408 326 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 ATF6P18850 670 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 CDH5P33151 784 aaPredicted RBP16.45■□□□□ 0.22
CNN1-202ENST00000535659 EIF4A3P38919 411 aaKnown RBP16.45■□□□□ 0.22
CNN1-202ENST00000535659 GPR15P49685 360 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 CTC1Q2NKJ3 1217 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 SDHAF4Q5VUM1 108 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 PIGZQ86VD9 579 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 VPS36Q86VN1 386 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 SLC30A5Q8TAD4 765 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 GIPC2Q8TF65 315 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 STK32AQ8WU08 396 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 PNPLA8Q9NP80 782 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 SEPT11Q9NVA2 429 aaKnown RBP16.45■□□□□ 0.22
CNN1-202ENST00000535659 ADAMTS1Q9UHI8 967 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 PLXNA3P51805 1871 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 SPTBN5Q9NRC6 3674 aaKnown RBP16.45■□□□□ 0.22
CNN1-202ENST00000535659 PRRC2BQ5JSZ5 2229 aaKnown RBP16.45■□□□□ 0.22
CNN1-202ENST00000535659 SSU72P8A0A1W2PR75 194 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 SPDYE4A6NLX3 237 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 HHLA1C9JL84 531 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 RFPL2O75678 378 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 GLP2RO95838 553 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 HOXA9P31269 272 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 PLA2G4AP47712 749 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
CNN1-202ENST00000535659 PMF1Q6P1K2 205 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 CYP26C1Q6V0L0 522 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 TMTC1Q8IUR5 882 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 OLIG1Q8TAK6 271 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 GPR152Q8TDT2 470 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 KCTD13Q8WZ19 329 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 HSFY1Q96LI6 401 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 CCDC42Q96M95 316 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 NOX5Q96PH1 765 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.45■□□□□ 0.22
CNN1-202ENST00000535659 NHEJ1Q9H9Q4 299 aaPredicted RBP16.45■□□□□ 0.22
CNN1-202ENST00000535659 DZANK1Q9NVP4 752 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 ZDHHC7Q9NXF8 308 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 CYTH4Q9UIA0 394 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 ASB3Q9Y575 518 aa16.45■□□□□ 0.22
CNN1-202ENST00000535659 CCDC195A0A1B0GUA6 201 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 DDX3XO00571 662 aaKnown RBP eCLIP16.44■□□□□ 0.22
CNN1-202ENST00000535659 TNFRSF10BO14763 440 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 UNGP13051 313 aaPredicted RBP16.44■□□□□ 0.22
CNN1-202ENST00000535659 FECHP22830 423 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 NOMO3P69849 1222 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 COL19A1Q14993 1142 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 VEPH1Q14D04 833 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 CCDC85BQ15834 202 aaPredicted RBP16.44■□□□□ 0.22
CNN1-202ENST00000535659 CLEC16AQ2KHT3 1053 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 ASTE1Q2TB18 679 aaPredicted RBP16.44■□□□□ 0.22
CNN1-202ENST00000535659 ANKRD54Q6NXT1 300 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 DENND5BQ6ZUT9 1274 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 DNAJB7Q7Z6W7 309 aaPredicted RBP16.44■□□□□ 0.22
CNN1-202ENST00000535659 ITIH5Q86UX2 942 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 NUP93Q8N1F7 819 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 CPA5Q8WXQ8 436 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 ZNF512Q96ME7 567 aaPredicted RBP16.44■□□□□ 0.22
CNN1-202ENST00000535659 BAG1Q99933 345 aaPredicted RBP16.44■□□□□ 0.22
CNN1-202ENST00000535659 SLC4A5Q9BY07 1137 aa16.44■□□□□ 0.22
CNN1-202ENST00000535659 EYSQ5T1H1 3165 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 SLC38A8A6NNN8 435 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 CCL16O15467 120 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 CSH1P0DML2 217 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 CSH2P0DML3 217 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 GZMAP12544 262 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 HOXB8P17481 243 aaPredicted RBP16.43■□□□□ 0.22
CNN1-202ENST00000535659 RPL34P49207 117 aaKnown RBP16.43■□□□□ 0.22
CNN1-202ENST00000535659 RGS7P49802 495 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 TAF12Q16514 161 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 RAB41Q5JT25 222 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 NAA35Q5VZE5 725 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 ACAD10Q6JQN1 1059 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 TMEM110Q86TL2 294 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 ERICH1Q86X53 443 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 ELMOD1Q8N336 334 aa16.43■□□□□ 0.22
CNN1-202ENST00000535659 C12orf76Q8N812 135 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms