RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 GHRP10912 638 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 YBX3P16989 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 STX2P32856 288 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 ZNF143P52747 638 aaPredicted RBP16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 NPNTQ6UXI9 565 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 FAM183BPQ6ZVS7 135 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 CENPUQ71F23 418 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 TDRPQ86YL5 185 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 RIBC1Q8N443 379 aaPredicted RBP16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 FAM71DQ8N9W8 422 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 ZC3H15Q8WU90 426 aaKnown RBP16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 PPP1R13LQ8WUF5 828 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 EMID1Q96A84 441 aaPredicted RBP16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 NSRP1Q9H0G5 558 aaKnown RBP16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 SLC40A1Q9NP59 571 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 VTA1Q9NP79 307 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 ITGA11Q9UKX5 1188 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 C2CD2Q9Y426 696 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 CLUHO75153 1309 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 C2CD4BA6NLJ0 364 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 APOC4-APOC2K7ER74 178 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 PPEF2O14830 753 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 TMEM63AO94886 807 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 APOC2P02655 101 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 P4HA1P13674 534 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 FOXN2P32314 431 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 RBP5P82980 135 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 ZKSCAN8Q15776 578 aaPredicted RBP16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 HIF1AQ16665 826 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 CGB2Q6NT52 195 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 LCLAT1Q6UWP7 414 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 ARHGEF18Q6ZSZ5 1173 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 TRPM8Q7Z2W7 1104 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 PPIL6Q8IXY8 311 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 TTC13Q8NBP0 860 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 RXFP2Q8WXD0 754 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 RSAD2Q8WXG1 361 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 P3H4Q92791 437 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 KIF12Q96FN5 646 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 TGS1Q96RS0 853 aaKnown RBP16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 RNF19AQ9NV58 838 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 NME7Q9Y5B8 376 aa16.07■□□□□ 0.16
CACNA1E-208ENST00000533229 PDHXO00330 501 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 ENDOD1O94919 500 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 PDGFRAP16234 1089 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 SMPD1P17405 629 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 SSTR1P30872 391 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 RGS7P49802 495 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 EIF3EP60228 445 aaKnown RBP16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 TMEM62Q0P6H9 643 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 ACAP1Q15027 740 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 GRIK4Q16099 956 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 KIZQ2M2Z5 673 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 PPP1R26Q5T8A7 1209 aaPredicted RBP16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 OR6B2Q6IFH4 312 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 UPF1Q92900 1129 aaKnown RBP eCLIP16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 SLC10A4Q96EP9 437 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 ZMAT2Q96NC0 199 aaKnown RBP16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 HAUS2Q9NVX0 235 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 ASNSD1Q9NWL6 643 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 USP15Q9Y4E8 981 aaPredicted RBP16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 A0A1W2PPM1 405 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 FAM47DPA6NHR8 397 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 ADCY6O43306 1168 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 RBP3P10745 1247 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 HOXA11P31270 313 aaPredicted RBP16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 PCK1P35558 622 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 EFTUD2Q15029 972 aaKnown RBP eCLIP16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 CDO1Q16878 200 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 PMF1Q6P1K2 205 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 C4orf33Q8N1A6 199 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 SPATA18Q8TC71 538 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 MAGEB18Q96M61 343 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 MRPL45Q9BRJ2 306 aaKnown RBP16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 NT5C1AQ9BXI3 368 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 UBN1Q9NPG3 1134 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 NKIRAS1Q9NYS0 192 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 RABGEF1Q9UJ41 708 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 SLC12A4Q9UP95 1085 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 GINS2Q9Y248 185 aa16.06■□□□□ 0.16
CACNA1E-208ENST00000533229 COL1A2P08123 1366 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 ASMTLO95671 621 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 TAC1P20366 129 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 GPD1P21695 349 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 GTF2A1P52655 376 aaPredicted RBP16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 CDH6P55285 790 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 CCDC14Q49A88 953 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 FAM133BQ5BKY9 247 aaKnown RBP16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 PCGF5Q86SE9 256 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 ZC3H18Q86VM9 953 aaKnown RBP16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 TTC30AQ86WT1 665 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 FUKQ8N0W3 1084 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 DENND1AQ8TEH3 1009 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 MS4A4AQ96JQ5 239 aa16.05■□□□□ 0.16
CACNA1E-208ENST00000533229 LPIN3Q9BQK8 851 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms