RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ADH1CP00326 375 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 ABL1P00519 1130 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 SPINK2P20155 84 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 HOXD12P35452 270 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 DDIT3P35638 169 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 EIF2DP41214 584 aaKnown RBP12.36□□□□□ -0.43
CMTM1-216ENST00000533078 IRX4P78413 519 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 CYP27A1Q02318 531 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 RESTQ13127 1097 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 ALCAMQ13740 583 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 COL9A2Q14055 689 aaPredicted RBP12.36□□□□□ -0.43
CMTM1-216ENST00000533078 SPDYCQ5MJ68 293 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 CRELD2Q6UXH1 353 aaPredicted RBP12.36□□□□□ -0.43
CMTM1-216ENST00000533078 DPH6Q7L8W6 267 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 DYMQ7RTS9 669 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 TRMT11Q7Z4G4 463 aaKnown RBP12.36□□□□□ -0.43
CMTM1-216ENST00000533078 RABEPKQ7Z6M1 372 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 SFR1Q86XK3 245 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 DDX42Q86XP3 938 aaKnown RBP eCLIP12.36□□□□□ -0.43
CMTM1-216ENST00000533078 C1orf127Q8N9H9 656 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 SPATA17Q96L03 361 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 SLC22A12Q96S37 553 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 FIZ1Q96SL8 496 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 PNKPQ96T60 521 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 GCNT4Q9P109 453 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 CDH9Q9ULB4 789 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 NEUROG3Q9Y4Z2 214 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 KIAA1549LQ6ZVL6 1849 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 DMXL2Q8TDJ6 3036 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 K7EQS6 105 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 LEFTY2O00292 366 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 CDX4O14627 284 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-216ENST00000533078 TNNC2P02585 160 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 CFIP05156 583 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 BCKDHBP21953 392 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 GARTP22102 1010 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 GJB2P29033 226 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 TIE1P35590 1138 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 ACAP1Q15027 740 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 SURF1Q15526 300 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 L1TD1Q5T7N2 865 aaKnown RBP12.35□□□□□ -0.43
CMTM1-216ENST00000533078 LYSMD4Q5XG99 296 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 BTBD8Q5XKL5 378 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 KIAA1211LQ6NV74 962 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 ARMCX6Q7L4S7 300 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 FILIP1Q7Z7B0 1213 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 TXNDC5Q8NBS9 432 aaKnown RBP12.35□□□□□ -0.43
CMTM1-216ENST00000533078 CEP76Q8TAP6 659 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 EZH1Q92800 747 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-216ENST00000533078 MYLPFQ96A32 169 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 SAAL1Q96ER3 474 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 SLITRK1Q96PX8 696 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 SYT15Q9BQS2 421 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 LINC00597Q9H2U6 94 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 STK17AQ9UEE5 414 aa12.35□□□□□ -0.43
CMTM1-216ENST00000533078 HELZP42694 1942 aaKnown RBP12.35□□□□□ -0.43
CMTM1-216ENST00000533078 FREM2Q5SZK8 3169 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 DSPP15924 2871 aaKnown RBP12.34□□□□□ -0.43
CMTM1-216ENST00000533078 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 GABRDO14764 452 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 KIAA0391O15091 583 aaKnown RBP12.34□□□□□ -0.43
CMTM1-216ENST00000533078 AP5Z1O43299 807 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 KAT7O95251 611 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 SEC24BO95487 1268 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 KLF8O95600 359 aaPredicted RBP12.34□□□□□ -0.43
CMTM1-216ENST00000533078 ENGP17813 658 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 BDNFP23560 247 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 ADSSP30520 456 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 OPRD1P41143 372 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 P2RY2P41231 377 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 GRIA2P42262 883 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 SIM1P81133 766 aaPredicted RBP12.34□□□□□ -0.43
CMTM1-216ENST00000533078 TDRD10Q5VZ19 366 aaKnown RBP12.34□□□□□ -0.43
CMTM1-216ENST00000533078 SLC36A4Q6YBV0 504 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 STXBP4Q6ZWJ1 553 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 SV2BQ7L1I2 683 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 BRAPQ7Z569 592 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 TMEFF1Q8IYR6 380 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 ALLCQ8N6M5 410 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 HMGB4Q8WW32 186 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 MMS19Q96T76 1030 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 PKMYT1Q99640 499 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 MTMR12Q9C0I1 747 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 ARHGEF4Q9NR80 690 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 PPP4R2Q9NY27 417 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 TBC1D14Q9P2M4 693 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 CPQQ9Y646 472 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 ANAPC1Q9H1A4 1944 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 ASCC3Q8N3C0 2202 aaKnown RBP12.34□□□□□ -0.43
CMTM1-216ENST00000533078 ZFYVE26Q68DK2 2539 aa12.34□□□□□ -0.43
CMTM1-216ENST00000533078 SRRM3A6NNA2 597 aaPredicted RBP12.33□□□□□ -0.44
CMTM1-216ENST00000533078 OPHN1O60890 802 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 PRPF6O94906 941 aaKnown RBP12.33□□□□□ -0.44
CMTM1-216ENST00000533078 CYP17A1P05093 508 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 ADH5P11766 374 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 IDEP14735 1019 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 PI4KAP42356 2102 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 TNFRSF4P43489 277 aa12.33□□□□□ -0.44
CMTM1-216ENST00000533078 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms