RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 TRPM5Q9NZQ8 1165 aa14.22□□□□□ -0.13
AMBRA1-210ENST00000531542 ZNF840PA6NDX5 716 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 CLIC2O15247 247 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 PDGFRBP09619 1106 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 PTPN1P18031 435 aaKnown RBP14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 CYP2J2P51589 502 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 TNNC1P63316 161 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 SLC7A9P82251 487 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 CYP27A1Q02318 531 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 CUL4BQ13620 913 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 PRR23BQ6ZRT6 265 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 SYT13Q7L8C5 426 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 HSCBQ8IWL3 235 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 NELFCDQ8IXH7 590 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 ARL14EPQ8N8R7 260 aaPredicted RBP14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 SH3RF2Q8TEC5 729 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 PARD3BQ8TEW8 1205 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 GAB3Q8WWW8 586 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 OVCA2Q8WZ82 227 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 MRPL45Q9BRJ2 306 aaKnown RBP14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 BLZF1Q9H2G9 400 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 FBRSL1Q9HCM7 1045 aaKnown RBP14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 TRPC7Q9HCX4 862 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 SLC39A2Q9NP94 309 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 USP25Q9UHP3 1055 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 CDV3Q9UKY7 258 aaKnown RBP14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 USP18Q9UMW8 372 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 NME7Q9Y5B8 376 aa14.21□□□□□ -0.13
AMBRA1-210ENST00000531542 DENND4CQ5VZ89 1909 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 MED19A0JLT2 244 aaPredicted RBP14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 C2orf78A6NCI8 922 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 KLRC4O43908 158 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 EXOC3O60645 756 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 EGFP01133 1207 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 HSP90AA1P07900 732 aaKnown RBP14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 IFNAR2P48551 515 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 MYL6P60660 151 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 USP46P62068 366 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 SPEM2Q0P670 501 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 TRPC3Q13507 836 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 MDH1BQ5I0G3 518 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 PKN3Q6P5Z2 889 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 CEP57L1Q8IYX8 460 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 B3GALNT2Q8NCR0 500 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 OR6B3Q8NGW1 331 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 NETO1Q8TDF5 533 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 CD101Q93033 1021 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 ZC3H10Q96K80 434 aaKnown RBP14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 DUSP9Q99956 384 aaKnown RBP14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 SEMA4GQ9NTN9 838 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 EBF1Q9UH73 591 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 SLC8A2Q9UPR5 921 aa14.2□□□□□ -0.14
AMBRA1-210ENST00000531542 F8VP50 259 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 PDXKO00764 312 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 ACTN4O43707 911 aaKnown RBP14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 RNF40O75150 1001 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 NFATC1O95644 943 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 OAS1P00973 400 aaKnown RBP14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 CMA1P23946 247 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 CASP1P29466 404 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 RAP1GAPP47736 663 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 STK4Q13043 487 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 SRSF5Q13243 272 aaKnown RBP14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 LPAL2Q16609 132 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 SNX30Q5VWJ9 437 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 TDRD10Q5VZ19 366 aaKnown RBP14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 HEATR6Q6AI08 1181 aaKnown RBP14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 CEP68Q76N32 757 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 CACNA2D4Q7Z3S7 1137 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 ADGRG2Q8IZP9 1017 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 FAM160A2Q8N612 972 aaPredicted RBP14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 EZH1Q92800 747 aaPredicted RBP14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 ACDQ96AP0 544 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 PAGE5Q96GU1 130 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 SLITRK1Q96PX8 696 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 COMMD8Q9NX08 183 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 IL37Q9NZH6 218 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 WNT6Q9Y6F9 365 aa14.19□□□□□ -0.14
AMBRA1-210ENST00000531542 FAM92AA1XBS5 289 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 A8MXQ7 604 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 LEFTY2O00292 366 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 SLC9A3R1O14745 358 aaPredicted RBP14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 SLC30A4O14863 429 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 IKBKBO14920 756 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 RPP40O75818 363 aaKnown RBP14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 RTN3O95197 1032 aaPredicted RBP14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 C4BPAP04003 597 aaKnown RBP14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 RPN1P04843 607 aaKnown RBP14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 EIF2DP41214 584 aaKnown RBP14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 AFMP43652 599 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 ZXDBP98169 803 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 DNM1Q05193 864 aaKnown RBP14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 PRR23CQ6ZRP0 262 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 DDX42Q86XP3 938 aaKnown RBP eCLIP14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 NUP93Q8N1F7 819 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 KIAA0895Q8NCT3 520 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 PDZD8Q8NEN9 1154 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 PLEKHO2Q8TD55 490 aa14.18□□□□□ -0.14
AMBRA1-210ENST00000531542 TMC2Q8TDI7 906 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms