RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 IRX4P78413 519 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 MKRN4PQ13434 485 aaPredicted RBP15.72■□□□□ 0.11
USP47-207ENST00000527733 CNGA2Q16280 664 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 ANKMY2Q8IV38 441 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 SLAIN1Q8ND83 568 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 DPF3Q92784 378 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 RPRD1AQ96P16 312 aaPredicted RBP15.72■□□□□ 0.11
USP47-207ENST00000527733 RRN3Q9NYV6 651 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 XPO7Q9UIA9 1087 aaKnown RBP15.72■□□□□ 0.11
USP47-207ENST00000527733 AP4E1Q9UPM8 1137 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 COL2A1P02458 1487 aaPredicted RBP15.72■□□□□ 0.11
USP47-207ENST00000527733 TREHO43280 583 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 SPIRE1Q08AE8 756 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 TSHZ1Q6ZSZ6 1077 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 MYLK4Q86YV6 388 aaPredicted RBP15.72■□□□□ 0.11
USP47-207ENST00000527733 FAM71DQ8N9W8 422 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 C9orf72Q96LT7 481 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 MUC3BQ9H195 1237 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 ZFATQ9P243 1243 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 CNTNAP2Q9UHC6 1331 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 IRS2Q9Y4H2 1338 aa15.72■□□□□ 0.11
USP47-207ENST00000527733 TOMM70O94826 608 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 NOVP48745 357 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 ADIGQ0VDE8 80 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 ARHGAP15Q53QZ3 475 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 ATG16L1Q676U5 607 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 EPM2AIP1Q7L775 607 aaPredicted RBP15.71■□□□□ 0.11
USP47-207ENST00000527733 VPS11Q9H270 941 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 FBXO44Q9H4M3 255 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 FAM105AQ9NUU6 356 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 FRMD3A2A2Y4 597 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 BRAFP15056 766 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 HNRNPH3P31942 346 aaKnown RBP15.71■□□□□ 0.11
USP47-207ENST00000527733 SKIV2LQ15477 1246 aaKnown RBP15.71■□□□□ 0.11
USP47-207ENST00000527733 SYCP2LQ5T4T6 812 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 DDX42Q86XP3 938 aaKnown RBP eCLIP15.71■□□□□ 0.11
USP47-207ENST00000527733 LRRC52Q8N7C0 313 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 ENTPD7Q9NQZ7 604 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 GPATCH2LQ9NWQ4 482 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 GIT1Q9Y2X7 761 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 MYH3P11055 1940 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 DHX15O43143 795 aaKnown RBP15.71■□□□□ 0.11
USP47-207ENST00000527733 KCNA10Q16322 511 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 ZCWPW2Q504Y3 356 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 GIMAP7Q8NHV1 300 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 TSPAN18Q96SJ8 248 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 TBCBQ99426 244 aa15.71■□□□□ 0.11
USP47-207ENST00000527733 NTPCRQ9BSD7 190 aaKnown RBP15.71■□□□□ 0.11
USP47-207ENST00000527733 ZC3H7BQ9UGR2 993 aaKnown RBP15.71■□□□□ 0.11
USP47-207ENST00000527733 CTIFO43310 598 aaKnown RBP15.71■□□□□ 0.1
USP47-207ENST00000527733 B4GALT4O60513 344 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 PAX3P23760 479 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 WSCD1Q658N2 575 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 WDR59Q6PJI9 974 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 SPOCD1Q6ZMY3 1216 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 C10orf67Q8IYJ2 551 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 PPFIBP2Q8ND30 876 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 C3orf20Q8ND61 904 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 TFB1MQ8WVM0 346 aaKnown RBP15.71■□□□□ 0.1
USP47-207ENST00000527733 TTC17Q96AE7 1141 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 UROC1Q96N76 676 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 ACP6Q9NPH0 428 aa15.71■□□□□ 0.1
USP47-207ENST00000527733 PRMT2P55345 433 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 KDELC2Q7Z4H8 507 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 DCLK2Q8N568 766 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 ATG4AQ8WYN0 398 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 FRMD8Q9BZ67 464 aaPredicted RBP15.7■□□□□ 0.1
USP47-207ENST00000527733 CKMP06732 381 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 DNAJB2P25686 324 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 ITGA8P53708 1063 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 CCL23P55773 120 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 PRKCZQ05513 592 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 EFEMP1Q12805 493 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 SCUBE3Q8IX30 993 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 ATP6V1G3Q96LB4 118 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 FAM129AQ9BZQ8 928 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 CYP4F11Q9HBI6 524 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 PTPN1P18031 435 aaKnown RBP15.7■□□□□ 0.1
USP47-207ENST00000527733 RPL9P32969 192 aaKnown RBP15.7■□□□□ 0.1
USP47-207ENST00000527733 EPHB3P54753 998 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 NOMO2Q5JPE7 1267 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 NUGGCQ68CJ6 796 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 NXF3Q9H4D5 531 aaKnown RBP15.7■□□□□ 0.1
USP47-207ENST00000527733 VIPAS39Q9H9C1 493 aa15.7■□□□□ 0.1
USP47-207ENST00000527733 TAC1P20366 129 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 PBX1P40424 430 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 CNPY4Q8N129 248 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 SHISA4Q96DD7 197 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 MYH14Q7Z406 1995 aaKnown RBP15.69■□□□□ 0.1
USP47-207ENST00000527733 CARNS1A5YM72 827 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 OTUD4Q01804 1114 aaKnown RBP15.69■□□□□ 0.1
USP47-207ENST00000527733 SLC6A3Q01959 620 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 PPHLN1Q8NEY8 458 aaKnown RBP15.69■□□□□ 0.1
USP47-207ENST00000527733 LENG1Q96BZ8 264 aaPredicted RBP15.69■□□□□ 0.1
USP47-207ENST00000527733 TLR10Q9BXR5 811 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 DERAQ9Y315 318 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 SLC12A8A0AV02 714 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 ARHGAP42A6NI28 874 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 E5RJQ4 531 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 CDH16O75309 829 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms