RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 TMEM253P0C7T8 217 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 CDR2Q01850 454 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 TMTC4Q5T4D3 741 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 CLEC17AQ6ZS10 378 aa17.76■□□□□ 0.43
BEST1-203ENST00000524877 WEE1P30291 646 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 CASP2P42575 452 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 CUL3Q13618 768 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 MAP3K21Q5TCX8 1036 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 ARHGEF26Q96DR7 871 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 NCKAP1Q9Y2A7 1128 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 MRPS23Q9Y3D9 190 aaKnown RBP17.75■□□□□ 0.43
BEST1-203ENST00000524877 SLFN11Q7Z7L1 901 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 C1orf54Q8WWF1 131 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 LPPQ93052 612 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 MAN1A2O60476 641 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 ARSEP51690 589 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 TBX4P57082 545 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 IFT88Q13099 833 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 SYDE1Q6ZW31 735 aaPredicted RBP17.75■□□□□ 0.43
BEST1-203ENST00000524877 CEP70Q8NHQ1 597 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 TAS1R2Q8TE23 839 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 UBXN6Q9BZV1 441 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 RBPJLQ9UBG7 517 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 SNX24Q9Y343 169 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 TLE6Q9H808 572 aa17.75■□□□□ 0.43
BEST1-203ENST00000524877 COL16A1Q07092 1604 aaPredicted RBP17.75■□□□□ 0.43
BEST1-203ENST00000524877 OTOP2Q7RTS6 562 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 SGPL1O95470 568 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 SNHG28P0DPA3 235 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 PSMD5Q16401 504 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 PLPP4Q5VZY2 271 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 ZDHHC17Q8IUH5 632 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 PDZD8Q8NEN9 1154 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 AGAP3Q96P47 875 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 INPP4AQ96PE3 977 aaPredicted RBP17.74■□□□□ 0.43
BEST1-203ENST00000524877 UBAP1Q9NZ09 502 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 TBK1Q9UHD2 729 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 FAM187AA6NFU0 413 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 ZNF197O14709 1029 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 NCK2O43639 380 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 CLTBP09497 229 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 CCDC137Q6PK04 289 aaKnown RBP17.74■□□□□ 0.43
BEST1-203ENST00000524877 WDR75Q8IWA0 830 aaKnown RBP17.74■□□□□ 0.43
BEST1-203ENST00000524877 TSR3Q9UJK0 312 aaKnown RBP17.74■□□□□ 0.43
BEST1-203ENST00000524877 RASGRF2O14827 1237 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 BLVRAP53004 296 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 EIF3BP55884 814 aaKnown RBP17.74■□□□□ 0.43
BEST1-203ENST00000524877 C4orf22Q6V702 233 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 SLC25A41Q8N5S1 370 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 SERPINB11Q96P15 392 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 RNPEPQ9H4A4 650 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 RAB23Q9ULC3 237 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 LGR5O75473 907 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 NDUFS3O75489 264 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 GLUD1P00367 558 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 HIST1H2AGP0C0S8 130 aaPredicted RBP17.74■□□□□ 0.43
BEST1-203ENST00000524877 HSPA8P11142 646 aaKnown RBP17.74■□□□□ 0.43
BEST1-203ENST00000524877 HIST1H2ADP20671 130 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 ICAM3P32942 547 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 ATXN3P54252 364 aaPredicted RBP17.74■□□□□ 0.43
BEST1-203ENST00000524877 EARS2Q5JPH6 523 aaKnown RBP17.74■□□□□ 0.43
BEST1-203ENST00000524877 DLK2Q6UY11 383 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 HIST1H2AHQ96KK5 128 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 OSBPL9Q96SU4 736 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 ZBTB18Q99592 522 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 HIST1H2AJQ99878 128 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 H2AFJQ9BTM1 129 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 FAM105AQ9NUU6 356 aa17.74■□□□□ 0.43
BEST1-203ENST00000524877 CRYBG1Q9Y4K1 1723 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 SYF2O95926 243 aaKnown RBP17.73■□□□□ 0.43
BEST1-203ENST00000524877 IMPG1Q17R60 797 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 DDX42Q86XP3 938 aaKnown RBP eCLIP17.73■□□□□ 0.43
BEST1-203ENST00000524877 C4BP0C0L5 1744 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 CCR1P32246 355 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 CAPSQ13938 189 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 NR1I3Q14994 352 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 ATL2Q8NHH9 583 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 CORO1BQ9BR76 489 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 SEMA6BQ9H3T3 888 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 SLC10A3P09131 477 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 PTENP60484 403 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 SV2AQ7L0J3 742 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 ACO2Q99798 780 aaKnown RBP17.73■□□□□ 0.43
BEST1-203ENST00000524877 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.73■□□□□ 0.43
BEST1-203ENST00000524877 PLIN4Q96Q06 1357 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 ATP9AO75110 1047 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 EVX2Q03828 476 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 PDIA2Q13087 525 aaKnown RBP17.73■□□□□ 0.43
BEST1-203ENST00000524877 ATG16L1Q676U5 607 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 SLC24A5Q71RS6 500 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 DSG4Q86SJ6 1040 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 OOSP2Q86WS3 158 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 ERGIC2Q96RQ1 377 aa17.73■□□□□ 0.43
BEST1-203ENST00000524877 hCG_2014768A0A024R1R8 64 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 ANXA9O76027 345 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 ACSL3O95573 720 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 VCLP18206 1134 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 RHOAP61586 193 aa17.72■□□□□ 0.43
BEST1-203ENST00000524877 RBM23Q86U06 439 aaKnown RBP17.72■□□□□ 0.43
BEST1-203ENST00000524877 ZBTB45Q96K62 511 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms