RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 GARTP22102 1010 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 USP46P62068 366 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 ZXDBP98169 803 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 CEBPZQ03701 1054 aaKnown RBP27.73■■■□□ 2.03
PVT1-219ENST00000523427 MYO1EQ12965 1108 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 ERICH6BQ5W0A0 696 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 FAM171BQ6P995 826 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 CCDC26Q8TAB7 109 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 PIGKQ92643 395 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 HPDLQ96IR7 371 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 ANKRD36BP1Q96IX9 119 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 SMPD4Q9NXE4 827 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 TRPM5Q9NZQ8 1165 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 ANXA13P27216 316 aa27.72■■■□□ 2.03
PVT1-219ENST00000523427 MAGEA11P43364 429 aa27.72■■■□□ 2.03
PVT1-219ENST00000523427 SFTPA1Q8IWL2 248 aa27.72■■■□□ 2.03
PVT1-219ENST00000523427 MDGA1Q8NFP4 955 aa27.72■■■□□ 2.03
PVT1-219ENST00000523427 OR5B17Q8NGF7 314 aa27.72■■■□□ 2.03
PVT1-219ENST00000523427 RLN3Q8WXF3 142 aa27.72■■■□□ 2.03
PVT1-219ENST00000523427 MMS19Q96T76 1030 aa27.72■■■□□ 2.03
PVT1-219ENST00000523427 TMEM9BQ9NQ34 198 aa27.72■■■□□ 2.03
PVT1-219ENST00000523427 CRTAC1Q9NQ79 661 aa27.72■■■□□ 2.03
PVT1-219ENST00000523427 TOP3BO95985 862 aaKnown RBP27.71■■■□□ 2.03
PVT1-219ENST00000523427 TXLNAP40222 546 aa27.71■■■□□ 2.03
PVT1-219ENST00000523427 DENND5BQ6ZUT9 1274 aa27.71■■■□□ 2.03
PVT1-219ENST00000523427 ARMCX6Q7L4S7 300 aa27.71■■■□□ 2.03
PVT1-219ENST00000523427 FILIP1Q7Z7B0 1213 aa27.71■■■□□ 2.03
PVT1-219ENST00000523427 KBTBD7Q8WVZ9 684 aa27.71■■■□□ 2.03
PVT1-219ENST00000523427 PANK4Q9NVE7 773 aa27.71■■■□□ 2.03
PVT1-219ENST00000523427 FBXO2Q9UK22 296 aaPredicted RBP27.71■■■□□ 2.03
PVT1-219ENST00000523427 CDH9Q9ULB4 789 aa27.71■■■□□ 2.03
PVT1-219ENST00000523427 PTPRJQ12913 1337 aa27.7■■■□□ 2.03
PVT1-219ENST00000523427 THADAQ6YHU6 1953 aa27.7■■■□□ 2.03
PVT1-219ENST00000523427 SLC6A11P48066 632 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 PDE6CP51160 858 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 IRX4P78413 519 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 IFRD2Q12894 506 aaPredicted RBP27.7■■■□□ 2.02
PVT1-219ENST00000523427 UNQ6494/PRO21346Q6UXR6 183 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 C11orf74Q86VG3 221 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 GPD1LQ8N335 351 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 ALLCQ8N6M5 410 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 SPATA18Q8TC71 538 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 CNOT6LQ96LI5 555 aaKnown RBP27.7■■■□□ 2.02
PVT1-219ENST00000523427 RNF38Q9H0F5 515 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 ZDHHC4Q9NPG8 344 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 INTS13Q9NVM9 706 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 MMP17Q9ULZ9 603 aa27.7■■■□□ 2.02
PVT1-219ENST00000523427 MAP3K13O43283 966 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 TNNC2P02585 160 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 CYP17A1P05093 508 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 HNRNPLP14866 589 aaKnown RBP eCLIP27.69■■■□□ 2.026e-25■■■□□ 16
PVT1-219ENST00000523427 TIE1P35590 1138 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 CRY1Q16526 586 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 GAB4Q2WGN9 574 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 FAM173BQ6P4H8 233 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 VSTM1Q6UX27 236 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 TMEM92Q6UXU6 159 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 HS2ST1Q7LGA3 356 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 RASSF3Q86WH2 238 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 TXNDC5Q8NBS9 432 aaKnown RBP27.69■■■□□ 2.02
PVT1-219ENST00000523427 SPATA17Q96L03 361 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 OLFML3Q9NRN5 406 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 CPQQ9Y646 472 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 MYO16Q9Y6X6 1858 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 ANAPC1Q9H1A4 1944 aa27.69■■■□□ 2.02
PVT1-219ENST00000523427 KLF8O95600 359 aaPredicted RBP27.68■■■□□ 2.02
PVT1-219ENST00000523427 TCF3P15923 654 aa27.68■■■□□ 2.02
PVT1-219ENST00000523427 STAT6P42226 847 aa27.68■■■□□ 2.02
PVT1-219ENST00000523427 MDH1BQ5I0G3 518 aa27.68■■■□□ 2.02
PVT1-219ENST00000523427 EMC10Q5UCC4 262 aa27.68■■■□□ 2.02
PVT1-219ENST00000523427 DPH6Q7L8W6 267 aa27.68■■■□□ 2.02
PVT1-219ENST00000523427 FRMD1Q8N878 549 aa27.68■■■□□ 2.02
PVT1-219ENST00000523427 PCED1BQ96HM7 432 aa27.68■■■□□ 2.02
PVT1-219ENST00000523427 BCCIPQ9P287 314 aaKnown RBP eCLIP27.68■■■□□ 2.02
PVT1-219ENST00000523427 NUP205Q92621 2012 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 F8VP50 259 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 CDX4O14627 284 aaPredicted RBP27.67■■■□□ 2.02
PVT1-219ENST00000523427 ALDH1A2O94788 518 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 MAPK8P45983 427 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 MESP2Q0VG99 397 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 ALCAMQ13740 583 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 DHCR24Q15392 516 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 MAPRE1Q15691 268 aaKnown RBP27.67■■■□□ 2.02
PVT1-219ENST00000523427 CBWD2Q8IUF1 395 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 TMEFF1Q8IYR6 380 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 DEFB124Q8NES8 71 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 CFAP97Q9P2B7 532 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 ZMIZ1Q9ULJ6 1067 aa27.67■■■□□ 2.02
PVT1-219ENST00000523427 SRPRBQ9Y5M8 271 aaKnown RBP27.67■■■□□ 2.02
PVT1-219ENST00000523427 IGF2RP11717 2491 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 ZNF840PA6NDX5 716 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 ZNF233A6NK53 670 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 KDSRQ06136 332 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 DUOXA2Q1HG44 320 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 CCDC73Q6ZRK6 1079 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 ADGRG2Q8IZP9 1017 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 PGBD3Q8N328 593 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 GLIS3Q8NEA6 775 aa27.66■■■□□ 2.02
PVT1-219ENST00000523427 HPS3Q969F9 1004 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms