RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 INCA1Q0VD86 236 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 MAMLD1Q13495 774 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 PIGHQ14442 188 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 ACAP1Q15027 740 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 GRIK4Q16099 956 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 ZNF667Q5HYK9 610 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 EEF1DP3Q658K8 133 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 LMBRD2Q68DH5 695 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 SPOPLQ6IQ16 392 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 DRICH1Q6PGQ1 229 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 CEP128Q6ZU80 1094 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 POLNQ7Z5Q5 900 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 DNAAF5Q86Y56 855 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 JAMLQ86YT9 394 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 PRELID2Q8N945 189 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 C3orf20Q8ND61 904 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 OR6J1Q8NGC5 347 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 EXD1Q8NHP7 514 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 CXorf38Q8TB03 319 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 FEZF2Q8TBJ5 459 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 CCHCR1Q8TD31 782 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 USP6NLQ92738 828 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 KRT35Q92764 455 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 CYFIP2Q96F07 1278 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 RBM41Q96IZ5 413 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 KATNAL1Q9BW62 490 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 AP1M1Q9BXS5 423 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 FRMD8P1Q9BZ68 369 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 GCOM2Q9BZD3 368 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 DNAI2Q9GZS0 605 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 DDX47Q9H0S4 455 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 IGFLR1Q9H665 355 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 AMACRQ9UHK6 382 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 ADAM21Q9UKJ8 722 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 NFU1Q9UMS0 254 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 EFR3BQ9Y2G0 817 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 PASKQ96RG2 1323 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 A0A087WZ62 844 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 TMEM191CA6NGB0 347 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 HMGB1P1B2RPK0 211 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 HAS3O00219 553 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 TTI1O43156 1089 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 B4GALT5O43286 388 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 XYLBO75191 536 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 PPFIA2O75334 1257 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 CELF2O95319 508 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 CST3P01034 146 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 HMGCRP04035 888 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 FAM163BP0C2L3 166 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 SETSIPP0DME0 302 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 CXCL8P10145 99 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 PYGMP11217 842 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 VDRP11473 427 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 HARSP12081 509 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 ITGA4P13612 1032 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 ARF4P18085 180 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 HOXC8P31273 242 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 COILP38432 576 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 CPT1AP50416 773 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 NKX3-2P78367 333 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 ADAM17P78536 824 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 RBP5P82980 135 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 LACTBP83111 547 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 TFAMQ00059 246 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 CAV1Q03135 178 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 LMNB2Q03252 620 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 HLTFQ14527 1009 aaKnown RBP eCLIP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 TMEM132DQ14C87 1099 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 SIX1Q15475 284 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 MARCH8Q5T0T0 291 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 RUFY4Q6ZNE9 571 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 C8orf86Q6ZUL3 223 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 GSPT2Q8IYD1 628 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 THNSL1Q8IYQ7 743 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 KIAA0319LQ8IZA0 1049 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 NME8Q8N427 588 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 LRRC52Q8N7C0 313 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 BEND7Q8N7W2 519 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 C1orf127Q8N9H9 656 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 BBOF1Q8ND07 529 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 GPR152Q8TDT2 470 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 TRAPPC12Q8WVT3 735 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 MAGOHBQ96A72 148 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 ACAP3Q96P50 834 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 FMO2Q99518 471 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 PTPN18Q99952 460 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 NCAPGQ9BPX3 1015 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 FDXACB1Q9BRP7 624 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 TXLNGYQ9BZA5 131 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 FOXP3Q9BZS1 431 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 UBE2OQ9C0C9 1292 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 SUV39H2Q9H5I1 410 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 MINDY3Q9H8M7 445 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 ZNF408Q9H9D4 720 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 ACP6Q9NPH0 428 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 DNAJB12Q9NXW2 375 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 DDX56Q9NY93 547 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 VPS18Q9P253 973 aa7.08□□□□□ -1.28
CTNNA1-228ENST00000521640 MTRF1LQ9UGC7 380 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms