RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TTPALQ9BTX7 342 aa9□□□□□ -0.97
VAPB-206ENST00000520497 SLC4A5Q9BY07 1137 aa9□□□□□ -0.97
VAPB-206ENST00000520497 DUSP16Q9BY84 665 aa9□□□□□ -0.97
VAPB-206ENST00000520497 ZCWPW1Q9H0M4 648 aa9□□□□□ -0.97
VAPB-206ENST00000520497 MTIF3Q9H2K0 278 aaKnown RBP9□□□□□ -0.97
VAPB-206ENST00000520497 CYLDQ9NQC7 956 aa9□□□□□ -0.97
VAPB-206ENST00000520497 CHST7Q9NS84 486 aa9□□□□□ -0.97
VAPB-206ENST00000520497 TMEM30AQ9NV96 361 aa9□□□□□ -0.97
VAPB-206ENST00000520497 TMLHEQ9NVH6 421 aa9□□□□□ -0.97
VAPB-206ENST00000520497 UVRAGQ9P2Y5 699 aa9□□□□□ -0.97
VAPB-206ENST00000520497 TJP2Q9UDY2 1190 aa9□□□□□ -0.97
VAPB-206ENST00000520497 CNOT8Q9UFF9 292 aaKnown RBP9□□□□□ -0.97
VAPB-206ENST00000520497 LCMT1Q9UIC8 334 aa9□□□□□ -0.97
VAPB-206ENST00000520497 STRIP2Q9ULQ0 834 aa9□□□□□ -0.97
VAPB-206ENST00000520497 COG5Q9UP83 839 aa9□□□□□ -0.97
VAPB-206ENST00000520497 INSL6Q9Y581 213 aa9□□□□□ -0.97
VAPB-206ENST00000520497 SLC4A7Q9Y6M7 1214 aa9□□□□□ -0.97
VAPB-206ENST00000520497 DOCK4Q8N1I0 1966 aa9□□□□□ -0.97
VAPB-206ENST00000520497 HELZP42694 1942 aaKnown RBP8.99□□□□□ -0.97
VAPB-206ENST00000520497 GRID2IPA4D2P6 1211 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 OR6C75A6NL08 312 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 GRXCR1A8MXD5 290 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 CLDN5O00501 218 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 DYNC1I1O14576 645 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 SOD2P04179 222 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 ERBB2P04626 1255 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 FAM200BP0CF97 657 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 C7P10643 843 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 TCP1P17987 556 aaKnown RBP8.99□□□□□ -0.97
VAPB-206ENST00000520497 GTF2F1P35269 517 aaKnown RBP eCLIP8.99□□□□□ -0.97
VAPB-206ENST00000520497 PPM1AP35813 382 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 MAMLD1Q13495 774 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 ZNF268Q14587 947 aaPredicted RBP8.99□□□□□ -0.97
VAPB-206ENST00000520497 USP41Q3LFD5 358 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 CTXN3Q4LDR2 81 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 PPP1R15BQ5SWA1 713 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 SPOUT1Q5T280 376 aaKnown RBP8.99□□□□□ -0.97
VAPB-206ENST00000520497 CYP4A22Q5TCH4 519 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 CCDC181Q5TID7 509 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 CCDC70Q6NSX1 233 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 C11orf63Q6NUN7 778 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 LLGL2Q6P1M3 1020 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 ANKS3Q6ZW76 656 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 SLFN11Q7Z7L1 901 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 DDX53Q86TM3 631 aaKnown RBP8.99□□□□□ -0.97
VAPB-206ENST00000520497 CEP57Q86XR8 500 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 XYLT1Q86Y38 959 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 FIBCD1Q8N539 461 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 C3orf20Q8ND61 904 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 ZMIZ2Q8NF64 920 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 ZNF564Q8TBZ8 553 aaPredicted RBP8.99□□□□□ -0.97
VAPB-206ENST00000520497 MYLIPQ8WY64 445 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 SLC39A7Q92504 469 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 C18orf8Q96DM3 657 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 MCRS1Q96EZ8 462 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 SMARCD1Q96GM5 515 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 TMEM169Q96HH4 297 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 RPGRIP1Q96KN7 1286 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 HSFY1Q96LI6 401 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 CDX2Q99626 313 aaPredicted RBP8.99□□□□□ -0.97
VAPB-206ENST00000520497 SMOQ99835 787 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 HERC2P3Q9BVR0 1158 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 NUP85Q9BW27 656 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 OXCT2Q9BYC2 517 aaPredicted RBP8.99□□□□□ -0.97
VAPB-206ENST00000520497 CSNK1G1Q9HCP0 422 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 KRT82Q9NSB4 513 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 SPG21Q9NZD8 308 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 CTTNBP2NLQ9P2B4 639 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 WDR35Q9P2L0 1181 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 MTRRQ9UBK8 725 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 CHORDC1Q9UHD1 332 aaPredicted RBP8.99□□□□□ -0.97
VAPB-206ENST00000520497 CDC23Q9UJX2 597 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 HYOU1Q9Y4L1 999 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 MRFAP1Q9Y605 127 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 SAR1BQ9Y6B6 198 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 SCINQ9Y6U3 715 aa8.99□□□□□ -0.97
VAPB-206ENST00000520497 LCHNA4D1U4 455 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 HHLA1C9JL84 531 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 E5RJQ4 531 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 H7C4K7 107 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 TLL1O43897 1013 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 BUB1BO60566 1050 aaPredicted RBP8.98□□□□□ -0.97
VAPB-206ENST00000520497 PALMO75781 387 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 AP1G2O75843 785 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 BEST1O76090 585 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 OR4Q2P0C623 313 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 PRLRP16471 622 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 SCNN1AP37088 669 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 CACNA2D1P54289 1103 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 DSG1Q02413 1049 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 CLUL1Q15846 466 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 CFAP221Q4G0U5 840 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 SLC39A12Q504Y0 691 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 RAB41Q5JT25 222 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 SLC8B1Q6J4K2 584 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 OLFML1Q6UWY5 402 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 RSPO2Q6UXX9 243 aaPredicted RBP8.98□□□□□ -0.97
VAPB-206ENST00000520497 C4orf50Q6ZRC1 276 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 GPR65Q8IYL9 337 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 DCP1BQ8IZD4 617 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms