RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 PCED1BQ96HM7 432 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 HPDLQ96IR7 371 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 MYRFLQ96LU7 910 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 ZNF560Q96MR9 790 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 CGRRF1Q99675 332 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 C7orf25Q9BPX7 421 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 ACBD6Q9BR61 282 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 OXCT2Q9BYC2 517 aaPredicted RBP9.26□□□□□ -0.93
PABPC1-213ENST00000519848 RNF38Q9H0F5 515 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 LINC00597Q9H2U6 94 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 GOLPH3LQ9H4A5 285 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 SLC39A2Q9NP94 309 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 OBP2AQ9NY56 170 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 SERTAD1Q9UHV2 236 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 DSEQ9UL01 958 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 ASB3Q9Y575 518 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 PCDHB5Q9Y5E4 795 aa9.26□□□□□ -0.93
PABPC1-213ENST00000519848 LRRIQ3A6PVS8 624 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 EIF3DO15371 548 aaKnown RBP eCLIP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 POLR2DO15514 142 aaKnown RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 CUTAO60888 179 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 OLFM2O95897 454 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 TMEM191BP0C7N4 346 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 SCP2P22307 547 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 WARSP23381 471 aaKnown RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 CDC25CP30307 473 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 OPRD1P41143 372 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 KPNA1P52294 538 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 CDH8P55286 799 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 SPEM2Q0P670 501 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 STK4Q13043 487 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 PSMD6Q15008 389 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 POSTNQ15063 836 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 SNRNP35Q16560 246 aaKnown RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 BMT2Q1RMZ1 405 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 RSPO4Q2I0M5 234 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 CFAP221Q4G0U5 840 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 ARHGAP29Q52LW3 1261 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 MDH1BQ5I0G3 518 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 SPOPLQ6IQ16 392 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 GPRIN1Q7Z2K8 1008 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 MON1AQ86VX9 555 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 RALGPS2Q86X27 583 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 SCN4BQ8IWT1 228 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 CCDC65Q8IXS2 484 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 SYCP3Q8IZU3 236 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 SPEM1Q8N4L4 309 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 TOP6BLQ8N6T0 577 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 TRMT2BQ96GJ1 504 aaKnown RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 TWNKQ96RR1 684 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 B3GNT5Q9BYG0 378 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 KCTD10Q9H3F6 313 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 ZSCAN16Q9H4T2 348 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 TRPC7Q9HCX4 862 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 ZDHHC4Q9NPG8 344 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 DAXXQ9UER7 740 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 KCNG1Q9UIX4 513 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 HCN2Q9UL51 889 aa9.25□□□□□ -0.93
PABPC1-213ENST00000519848 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
PABPC1-213ENST00000519848 F8VP50 259 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 MAN2B1O00754 1011 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 BEST1O76090 585 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 PAPSS2O95340 614 aaPredicted RBP9.24□□□□□ -0.93
PABPC1-213ENST00000519848 DLATP10515 647 aaKnown RBP9.24□□□□□ -0.93
PABPC1-213ENST00000519848 GJA4P35212 333 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 TXLNAP40222 546 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 PNPLA4P41247 253 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 MAGEA9P43362 315 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 TUFMP49411 452 aaKnown RBP9.24□□□□□ -0.93
PABPC1-213ENST00000519848 RBP5P82980 135 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 RUNX3Q13761 415 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 MTF1Q14872 753 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 VEPH1Q14D04 833 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 EML3Q32P44 896 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 ITPRIPL2Q3MIP1 535 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 TCEAL6Q6IPX3 200 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 SCARA5Q6ZMJ2 495 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 UNC13DQ70J99 1090 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 ITIH5Q86UX2 942 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 METTL23Q86XA0 190 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 WDR49Q8IV35 697 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 FAM160A2Q8N612 972 aaPredicted RBP9.24□□□□□ -0.93
PABPC1-213ENST00000519848 CELF5Q8N6W0 485 aaKnown RBP9.24□□□□□ -0.93
PABPC1-213ENST00000519848 SH3RF2Q8TEC5 729 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 C2orf15Q8WU43 125 aaKnown RBP9.24□□□□□ -0.93
PABPC1-213ENST00000519848 TCEAL3Q969E4 200 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 CCDC127Q96BQ5 260 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 HHIPQ96QV1 700 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 KCNK16Q96T55 309 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 HINFPQ9BQA5 517 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 SEMA4AQ9H3S1 761 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 ABCB6Q9NP58 842 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.24□□□□□ -0.934e-12■□□□□ 10.7
PABPC1-213ENST00000519848 TDP1Q9NUW8 608 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 EXOC7Q9UPT5 735 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 HPSEQ9Y251 543 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 NCOR2Q9Y618 2525 aa9.24□□□□□ -0.93
PABPC1-213ENST00000519848 LAMA1P25391 3075 aa9.23□□□□□ -0.93
PABPC1-213ENST00000519848 RALGAPA1Q6GYQ0 2036 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms