RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 NR2F2P24468 414 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 PIK3CAP42336 1068 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 VAMP7P51809 220 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 CDH8P55286 799 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 NOP14P78316 857 aaKnown RBP14.54□□□□□ -0.08
TCOF1-215ENST00000515516 DLG4P78352 724 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 SATB1Q01826 763 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 ZACNQ401N2 412 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 INTS8Q75QN2 995 aaKnown RBP14.54□□□□□ -0.08
TCOF1-215ENST00000515516 NUP93Q8N1F7 819 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 CCDC150Q8NCX0 1101 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 SH3RF2Q8TEC5 729 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 OSCP1Q8WVF1 389 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 NELL1Q92832 810 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 ATP2A3Q93084 1043 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 TTLL2Q9BWV7 592 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 B3GNT5Q9BYG0 378 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 IMPG2Q9BZV3 1241 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 ZNF518BQ9C0D4 1074 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 DNAI2Q9GZS0 605 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 GDPD2Q9HCC8 539 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 HPS4Q9NQG7 708 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 MAPK8IP1Q9UQF2 711 aa14.54□□□□□ -0.08
TCOF1-215ENST00000515516 C2orf78A6NCI8 922 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 CLDN5O00501 218 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 LILRB5O75023 590 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 ATG13O75143 517 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 RTN3O95197 1032 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-215ENST00000515516 VNN1O95497 513 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 YWHAQP27348 245 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 RAP1GAPP47736 663 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 USP46P62068 366 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 NUCB2P80303 420 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 IFRD2Q12894 506 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-215ENST00000515516 ADAM9Q13443 819 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 CCINQ13939 588 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 ZNF77Q15935 545 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 NFIL3Q16649 462 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 Q6ZS52 159 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 SV2AQ7L0J3 742 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 FAM186BQ8IYM0 893 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 KIAA2013Q8IYS2 634 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 GUF1Q8N442 669 aaKnown RBP14.53□□□□□ -0.08
TCOF1-215ENST00000515516 SUMF1Q8NBK3 374 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 SLC22A12Q96S37 553 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 EPC1Q9H2F5 836 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 GOLPH3LQ9H4A5 285 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 ECT2Q9H8V3 914 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 RMND1Q9NWS8 449 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 GCNT4Q9P109 453 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 ARHGAP26Q9UNA1 814 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 SMG5Q9UPR3 1016 aaKnown RBP14.53□□□□□ -0.08
TCOF1-215ENST00000515516 NME7Q9Y5B8 376 aa14.53□□□□□ -0.08
TCOF1-215ENST00000515516 ZNF840PA6NDX5 716 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 TRDMT1O14717 391 aaKnown RBP14.52□□□□□ -0.09
TCOF1-215ENST00000515516 DRD1P21728 446 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 PSMC2P35998 433 aaKnown RBP14.52□□□□□ -0.09
TCOF1-215ENST00000515516 ID4P47928 161 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 TAF10Q12962 218 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 USP4Q13107 963 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 GAS6Q14393 721 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 TMEM196Q5HYL7 178 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 ACOT1Q86TX2 421 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 GPR161Q8N6U8 529 aaKnown RBP14.52□□□□□ -0.09
TCOF1-215ENST00000515516 PDZD8Q8NEN9 1154 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 SMARCD1Q96GM5 515 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 P2RY13Q9BPV8 354 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 DMAP1Q9NPF5 467 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-215ENST00000515516 HOOK1Q9UJC3 728 aaKnown RBP14.52□□□□□ -0.09
TCOF1-215ENST00000515516 GMEB2Q9UKD1 530 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 WNT6Q9Y6F9 365 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 TCHHQ07283 1943 aa14.52□□□□□ -0.09
TCOF1-215ENST00000515516 LEFTY2O00292 366 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 AKAP3O75969 853 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 PAPSS2O95340 614 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-215ENST00000515516 SMC2O95347 1197 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 NFATC1O95644 943 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 HLA-DRAP01903 254 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 TDGF1P13385 188 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 TCF3P15923 654 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 CNR2P34972 360 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 GJA4P35212 333 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 GALK1P51570 392 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 ENPEPQ07075 957 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 PRR23BQ6ZRT6 265 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 FAM35AQ86V20 835 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 LONP2Q86WA8 852 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 UNC93AQ86WB7 457 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 DCLK2Q8N568 766 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 RIN3Q8TB24 985 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 OVCA2Q8WZ82 227 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 FBXO32Q969P5 355 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 ELMO3Q96BJ8 720 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 MMRN2Q9H8L6 949 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 SLC8A2Q9UPR5 921 aa14.51□□□□□ -0.09
TCOF1-215ENST00000515516 USP34Q70CQ2 3546 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 OTOL1A6NHN0 477 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-215ENST00000515516 CHURC1-FNTBB4DL54 471 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 SLC9A3R1O14745 358 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-215ENST00000515516 STX10O60499 249 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms