RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 NXPE2Q96DL1 559 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 PNKPQ96T60 521 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 CDC6Q99741 560 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 PI4K2AQ9BTU6 479 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 ZDHHC5Q9C0B5 715 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 FAM124BQ9H5Z6 455 aaPredicted RBP9.86□□□□□ -0.83
NUP54-211ENST00000512151 TMEM206Q9H813 350 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 TTC12Q9H892 705 aaPredicted RBP9.86□□□□□ -0.83
NUP54-211ENST00000512151 ZSWIM6Q9HCJ5 1215 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 ABI2Q9NYB9 513 aaPredicted RBP9.86□□□□□ -0.83
NUP54-211ENST00000512151 SPTAN1Q13813 2472 aaKnown RBP9.85□□□□□ -0.83
NUP54-211ENST00000512151 BTBD18B2RXH4 712 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 SLC28A2O43868 658 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 APODP05090 189 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 CKMP06732 381 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 TCF3P15923 654 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 NDUFV2P19404 249 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 LILRA4P59901 499 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 CCDC173Q0VFZ6 552 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 DHCR24Q15392 516 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 HLA-BQ31612 363 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 MPZL3Q6UWV2 235 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 ZCCHC9Q8N567 271 aaKnown RBP9.85□□□□□ -0.83
NUP54-211ENST00000512151 SNIP1Q8TAD8 396 aaKnown RBP9.85□□□□□ -0.83
NUP54-211ENST00000512151 ARID3AQ99856 593 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 MRPL4Q9BYD3 311 aaKnown RBP9.85□□□□□ -0.83
NUP54-211ENST00000512151 AGXT2Q9BYV1 514 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 TM6SF1Q9BZW5 370 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 HAPLN2Q9GZV7 340 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 GMIPQ9P107 970 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 SUSD2Q9UGT4 822 aa9.85□□□□□ -0.83
NUP54-211ENST00000512151 SCN1AP35498 2009 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 PHLPP2Q6ZVD8 1323 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 STK36Q9NRP7 1315 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 TRAV19A0A0A6YYK7 116 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 A0A1B0GTW7 788 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 TTC26A0AVF1 554 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 ARHGEF35A5YM69 484 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 MYMKA6NI61 221 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 TRIM66O15016 1216 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 FLRT2O43155 660 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 RRP8O43159 456 aaKnown RBP9.84□□□□□ -0.83
NUP54-211ENST00000512151 TNFSF14O43557 240 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 NOL4O94818 638 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 DEXIO95424 95 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 CYP11A1P05108 521 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 ODC1P11926 461 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 C6P13671 934 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 RPS6KB1P23443 525 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 GRIA2P42262 883 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 MATKP42679 507 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 TXKP42681 527 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 NPTX2P47972 431 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 KRT32Q14532 448 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 SAFBQ15424 915 aaKnown RBP eCLIP9.84□□□□□ -0.83
NUP54-211ENST00000512151 CALCRLQ16602 461 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 DDR2Q16832 855 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 RHBDF2Q6PJF5 856 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 RUFY3Q7L099 469 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 FILIP1Q7Z7B0 1213 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 SPACA3Q8IXA5 215 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 TRIM22Q8IYM9 498 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 ADGRG2Q8IZP9 1017 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 SPATA18Q8TC71 538 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 SPPL2BQ8TCT7 592 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 DNASE2BQ8WZ79 361 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 IFT74Q96LB3 600 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 MTMR9Q96QG7 549 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 TCHPQ9BT92 498 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 TRIM4Q9C037 500 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 UPF2Q9HAU5 1272 aaKnown RBP9.84□□□□□ -0.83
NUP54-211ENST00000512151 ARHGEF4Q9NR80 690 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 DAXXQ9UER7 740 aaPredicted RBP9.84□□□□□ -0.83
NUP54-211ENST00000512151 ARHGAP26Q9UNA1 814 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 PCDHGB2Q9Y5G2 931 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 SLCO1B1Q9Y6L6 691 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 NOTCH2Q04721 2471 aa9.84□□□□□ -0.83
NUP54-211ENST00000512151 COL12A1Q99715 3063 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 UBR5O95071 2799 aaPredicted RBP9.83□□□□□ -0.84
NUP54-211ENST00000512151 MYLKQ15746 1914 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 CCDC169A6NNP5 214 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 LACTBL1A8MY62 500 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 LEFTY2O00292 366 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 SNPHO15079 494 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 HMGB1P09429 215 aaKnown RBP9.83□□□□□ -0.84
NUP54-211ENST00000512151 CSH1P0DML2 217 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 CSH2P0DML3 217 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 GNSP15586 552 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 CYP3A5P20815 502 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 TNFSF9P41273 254 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 TNFRSF4P43489 277 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 CSRP3P50461 194 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 ATP2C1P98194 919 aaPredicted RBP9.83□□□□□ -0.84
NUP54-211ENST00000512151 RESTQ13127 1097 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 ECM1Q16610 540 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 CCDC142Q17RM4 750 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 SYCP2LQ5T4T6 812 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 BLOC1S2Q6QNY1 142 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 TMPRSS12Q86WS5 348 aa9.83□□□□□ -0.84
NUP54-211ENST00000512151 DAW1Q8N136 415 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms