RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 FUBP3Q96I24 572 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 GCNAQ96QF7 691 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 SYT15Q9BQS2 421 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 MRPL45Q9BRJ2 306 aaKnown RBP6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 BACH2Q9BYV9 841 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 RNF38Q9H0F5 515 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 TNMDQ9H2S6 317 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 ZSCAN16Q9H4T2 348 aaPredicted RBP6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 TMEM206Q9H813 350 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 ECT2Q9H8V3 914 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 AGPAT3Q9NRZ7 376 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 RXFP3Q9NSD7 469 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 HSPBP1Q9NZL4 362 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 ZMYM5Q9UJ78 669 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 GMEB2Q9UKD1 530 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 WNT6Q9Y6F9 365 aa6.89□□□□□ -1.31
HMGN1P16-201ENST00000508308 WDFY3Q8IZQ1 3526 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 GON4LQ3T8J9 2241 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 CCDC163A0A0D9SF12 145 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 ZNF233A6NK53 670 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 K7ELQ4 463 aaPredicted RBP6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 TULP1O00294 542 aaPredicted RBP6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 SLC30A4O14863 429 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 TM4SF5O14894 197 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 CLIC2O15247 247 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 EIF3DO15371 548 aaKnown RBP eCLIP6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 PPP6R2O75170 966 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 TMEM191BP0C7N4 346 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 BDNFP23560 247 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 PCSK1P29120 753 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 RAP1GAPP47736 663 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 FAM160A1Q05DH4 1040 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 MTF1Q14872 753 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 PDGFRLQ15198 375 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 CCDC6Q16204 474 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 SNRNP35Q16560 246 aaKnown RBP6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 DUOXA2Q1HG44 320 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 PRR23CQ6ZRP0 262 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 DPH6Q7L8W6 267 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 KBTBD6Q86V97 674 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 SPATA2LQ8IUW3 424 aaPredicted RBP6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 WDR49Q8IV35 697 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 SFTPA1Q8IWL2 248 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 SCN4BQ8IWT1 228 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 CCDC65Q8IXS2 484 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 RDH13Q8NBN7 331 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 SH3RF2Q8TEC5 729 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 OSCP1Q8WVF1 389 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 GAB3Q8WWW8 586 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 SECISBP2LQ93073 1101 aaKnown RBP6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 MYLPFQ96A32 169 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 ELMO3Q96BJ8 720 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 PCED1BQ96HM7 432 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 ANKRD36BP1Q96IX9 119 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 SPATA17Q96L03 361 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 CNTNAP3BQ96NU0 1288 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 P2RY13Q9BPV8 354 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 C7orf25Q9BPX7 421 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 RTKNQ9BST9 563 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 TTLL2Q9BWV7 592 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 CNTNAP3Q9BZ76 1288 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 XYLT2Q9H1B5 865 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 DPEP3Q9H4B8 488 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 KIF9Q9HAQ2 790 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 TRPC7Q9HCX4 862 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 CDV3Q9UKY7 258 aaKnown RBP6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 CDH9Q9ULB4 789 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 RAB23Q9ULC3 237 aa6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 MYO18AQ92614 2054 aaKnown RBP6.88□□□□□ -1.31
HMGN1P16-201ENST00000508308 SPEGQ15772 3267 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 ZNF840PA6NDX5 716 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 F8VP50 259 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 K7EQS6 105 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 DCLK1O15075 740 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 KIAA0391O15091 583 aaKnown RBP6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 AXIN1O15169 862 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 KLRC4O43908 158 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 CUTAO60888 179 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 TACC1O75410 805 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 OLFM2O95897 454 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 TNNC2P02585 160 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 CKMP06732 381 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 USP17L7P0C7H9 530 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 HNRNPLP14866 589 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 TCF3P15923 654 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 HDCP19113 662 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 DRD1P21728 446 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 SDHBP21912 280 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 OPRD1P41143 372 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 CASP4P49662 377 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 CYP2J2P51589 502 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 ASIC1P78348 528 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 CYP24A1Q07973 514 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 GRSF1Q12849 480 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 MYO1EQ12965 1108 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 CUL4BQ13620 913 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 PKP1Q13835 747 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 PSMD6Q15008 389 aa6.87□□□□□ -1.31
HMGN1P16-201ENST00000508308 STK38Q15208 465 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms