RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 MYL6P60660 151 aa12.44□□□□□ -0.42
UBE3D-206ENST00000505226 SLC18A2Q05940 514 aa12.44□□□□□ -0.42
UBE3D-206ENST00000505226 PTK7Q13308 1070 aa12.44□□□□□ -0.42
UBE3D-206ENST00000505226 EMC2Q15006 297 aa12.44□□□□□ -0.42
UBE3D-206ENST00000505226 KLHL38Q2WGJ6 581 aa12.44□□□□□ -0.42
UBE3D-206ENST00000505226 RSBN1LQ6PCB5 846 aaPredicted RBP12.44□□□□□ -0.42
UBE3D-206ENST00000505226 EMC1Q8N766 993 aa12.44□□□□□ -0.42
UBE3D-206ENST00000505226 ATP6V0A1Q93050 837 aa12.44□□□□□ -0.42
UBE3D-206ENST00000505226 OXNAD1Q96HP4 312 aaPredicted RBP12.44□□□□□ -0.42
UBE3D-206ENST00000505226 H0YIN7 160 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 ABLIM1O14639 778 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 ASS1P00966 412 aaKnown RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 KDELR1P24390 212 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 ACTR2P61160 394 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 SP2Q02086 613 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 ZBTB16Q05516 673 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 THOC5Q13769 683 aaKnown RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 PTPN20Q4JDL3 420 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 IRGCQ6NXR0 463 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 DENND1BQ6P3S1 775 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 NPNTQ6UXI9 565 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 ABHD15Q6UXT9 468 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 BBS12Q6ZW61 710 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 PCGF5Q86SE9 256 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 CHSY1Q86X52 802 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 VPS52Q8N1B4 723 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 CLPTM1LQ96KA5 538 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 CISHQ9NSE2 258 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 DDX56Q9NY93 547 aaKnown RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 STRIP2Q9ULQ0 834 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 LRCH1Q9Y2L9 728 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 MTO1Q9Y2Z2 717 aaKnown RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 LRRIQ4A6NIV6 560 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 KBTBD13C9JR72 458 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 WDR46O15213 610 aaKnown RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 ATG7O95352 703 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 TGDSO95455 350 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 ESRRAP11474 423 aaPredicted RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 BASP1P80723 227 aaKnown RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 KRT72Q14CN4 511 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 TAZQ16635 292 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 NBPF20Q3BBV1 942 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 MDH1BQ5I0G3 518 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 RDM1Q8NG50 284 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 SLC44A1Q8WWI5 657 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 RSAD2Q8WXG1 361 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 APOPT1Q96IL0 206 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 TSC22D3Q99576 134 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 MTMR12Q9C0I1 747 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 SYNCQ9H7C4 482 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 PLAC1Q9HBJ0 212 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 STX18Q9P2W9 335 aaKnown RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 PCSK1NQ9UHG2 260 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 CAPN14A8MX76 684 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 CXorf49A8MYA2 514 aaPredicted RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 K7ERI5 159 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 AHCYL1O43865 530 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 PSMA2P25787 234 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 SERPINB4P48594 390 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 TGFB2P61812 414 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 DPYSL3Q14195 570 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 MCUR1Q96AQ8 359 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 ALKBH8Q96BT7 664 aaKnown RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 C20orf27Q9GZN8 174 aa12.43□□□□□ -0.42
UBE3D-206ENST00000505226 PAPOLBQ9NRJ5 636 aaKnown RBP12.43□□□□□ -0.42
UBE3D-206ENST00000505226 CYB561D2O14569 222 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 PSAPP07602 524 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 MMRN1Q13201 1228 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 SCARA5Q6ZMJ2 495 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 ZC3H18Q86VM9 953 aaKnown RBP12.42□□□□□ -0.42
UBE3D-206ENST00000505226 PDIK1LQ8N165 341 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 TMEM35BQ8NCS4 154 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 GATA6Q92908 595 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 CYTH2Q99418 400 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 JPH1Q9HDC5 661 aaPredicted RBP12.42□□□□□ -0.42
UBE3D-206ENST00000505226 MAP3K20Q9NYL2 800 aaKnown RBP12.42□□□□□ -0.42
UBE3D-206ENST00000505226 TEX264Q9Y6I9 313 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 COL4A5P29400 1685 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 FAM189A1O60320 539 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 PIGRP01833 764 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 PAPOLAP51003 745 aaKnown RBP12.42□□□□□ -0.42
UBE3D-206ENST00000505226 MAP3K10Q02779 954 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 AP1B1Q10567 949 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 SLC30A9Q6PML9 568 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 POLNQ7Z5Q5 900 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 DDX50Q9BQ39 737 aaKnown RBP12.42□□□□□ -0.42
UBE3D-206ENST00000505226 PHACTR1Q9C0D0 580 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 SLC9A2Q9UBY0 812 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 FER1L6Q2WGJ9 1857 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 UGT1A9O60656 530 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 LSM8O95777 96 aaKnown RBP12.42□□□□□ -0.42
UBE3D-206ENST00000505226 PGM1P36871 562 aa12.42□□□□□ -0.42
UBE3D-206ENST00000505226 GCLCP48506 637 aaPredicted RBP12.42□□□□□ -0.42
UBE3D-206ENST00000505226 MRPS5P82675 430 aaKnown RBP12.42□□□□□ -0.42
UBE3D-206ENST00000505226 ORC1Q13415 861 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms