RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 C11orf74Q86VG3 221 aa23.27■■□□□ 1.32
CLIC4-204ENST00000497755 ADGRG2Q8IZP9 1017 aa23.27■■□□□ 1.32
CLIC4-204ENST00000497755 OR5B17Q8NGF7 314 aa23.27■■□□□ 1.32
CLIC4-204ENST00000497755 NOC3LQ8WTT2 800 aaKnown RBP23.27■■□□□ 1.32
CLIC4-204ENST00000497755 MYLPFQ96A32 169 aa23.27■■□□□ 1.32
CLIC4-204ENST00000497755 CLIC6Q96NY7 704 aa23.27■■□□□ 1.32
CLIC4-204ENST00000497755 SYT15Q9BQS2 421 aa23.27■■□□□ 1.32
CLIC4-204ENST00000497755 INTS13Q9NVM9 706 aa23.27■■□□□ 1.32
CLIC4-204ENST00000497755 RALYQ9UKM9 306 aaKnown RBP23.27■■□□□ 1.32
CLIC4-204ENST00000497755 CDH9Q9ULB4 789 aa23.27■■□□□ 1.32
CLIC4-204ENST00000497755 WASF3Q9UPY6 502 aa23.27■■□□□ 1.32
CLIC4-204ENST00000497755 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.27■■□□□ 1.32
CLIC4-204ENST00000497755 SRPRBQ9Y5M8 271 aaKnown RBP23.27■■□□□ 1.32
CLIC4-204ENST00000497755 HELZP42694 1942 aaKnown RBP23.27■■□□□ 1.32
CLIC4-204ENST00000497755 PTPRJQ12913 1337 aa23.27■■□□□ 1.32
CLIC4-204ENST00000497755 IGF2RP11717 2491 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 FRMD3A2A2Y4 597 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 LEFTY2O00292 366 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 CDX4O14627 284 aaPredicted RBP23.26■■□□□ 1.31
CLIC4-204ENST00000497755 TMEM191BP0C7N4 346 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 PFKLP17858 780 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 PDE6CP51160 858 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 MYO1EQ12965 1108 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 SH3PXD2AQ5TCZ1 1133 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 CCDC33Q8N5R6 958 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 MDGA1Q8NFP4 955 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 HPDLQ96IR7 371 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 CNOT6LQ96LI5 555 aaKnown RBP23.26■■□□□ 1.31
CLIC4-204ENST00000497755 CEP295NLQ96MC4 621 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 RNF38Q9H0F5 515 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 TRPM5Q9NZQ8 1165 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 MMP17Q9ULZ9 603 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 MYO18AQ92614 2054 aaKnown RBP23.26■■□□□ 1.31
CLIC4-204ENST00000497755 PCNX2A6NKB5 2137 aa23.26■■□□□ 1.31
CLIC4-204ENST00000497755 C1QTNF9BB2RNN3 333 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 PATE3B3GLJ2 98 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 PRPF6O94906 941 aaKnown RBP23.25■■□□□ 1.31
CLIC4-204ENST00000497755 PDGFRBP09619 1106 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 C1QTNF9P0C862 333 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 IDEP14735 1019 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 HNRNPLP14866 589 aaKnown RBP eCLIP23.25■■□□□ 1.31
CLIC4-204ENST00000497755 GRIK1P39086 918 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 PI4KAP42356 2102 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 IRX4P78413 519 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 ALCAMQ13740 583 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 CRY1Q16526 586 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 DENND5BQ6ZUT9 1274 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 GPD1LQ8N335 351 aa23.25■■□□□ 1.31
CLIC4-204ENST00000497755 ZNF840PA6NDX5 716 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 CHRM1P11229 460 aaPredicted RBP23.24■■□□□ 1.31
CLIC4-204ENST00000497755 SLC6A11P48066 632 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 SLC7A9P82251 487 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 MRPS21P82921 87 aaKnown RBP23.24■■□□□ 1.31
CLIC4-204ENST00000497755 MAPRE1Q15691 268 aaKnown RBP23.24■■□□□ 1.31
CLIC4-204ENST00000497755 TMEM92Q6UXU6 159 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 FILIP1Q7Z7B0 1213 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 SFTPA1Q8IWL2 248 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 KIAA1958Q8N8K9 716 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 OLIG1Q8TAK6 271 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 ANKRD36BP1Q96IX9 119 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 TTLL2Q9BWV7 592 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 PANK2Q9BZ23 570 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 TMEM9BQ9NQ34 198 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 PANK4Q9NVE7 773 aa23.24■■□□□ 1.31
CLIC4-204ENST00000497755 CYP17A1P05093 508 aa23.23■■□□□ 1.31
CLIC4-204ENST00000497755 WARSP23381 471 aaKnown RBP23.23■■□□□ 1.31
CLIC4-204ENST00000497755 CYP27A1Q02318 531 aa23.23■■□□□ 1.31
CLIC4-204ENST00000497755 ZNF252P-AS1Q0IIN9 211 aa23.23■■□□□ 1.31
CLIC4-204ENST00000497755 MESP2Q0VG99 397 aa23.23■■□□□ 1.31
CLIC4-204ENST00000497755 DUOXA2Q1HG44 320 aa23.23■■□□□ 1.31
CLIC4-204ENST00000497755 CYP2U1Q7Z449 544 aa23.23■■□□□ 1.31
CLIC4-204ENST00000497755 MYCBPAPQ8TBZ2 947 aa23.23■■□□□ 1.31
CLIC4-204ENST00000497755 PCED1BQ96HM7 432 aa23.23■■□□□ 1.31
CLIC4-204ENST00000497755 R3HCC1Q9Y3T6 440 aaKnown RBP23.23■■□□□ 1.31
CLIC4-204ENST00000497755 ZNF233A6NK53 670 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 OLFM2O95897 454 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 TNNC2P02585 160 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 CEACAM1P13688 526 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 CSRP1P21291 193 aaKnown RBP23.22■■□□□ 1.31
CLIC4-204ENST00000497755 DHPSP49366 369 aaPredicted RBP23.22■■□□□ 1.31
CLIC4-204ENST00000497755 FOXC1Q12948 553 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 DHCR24Q15392 516 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 RHBDF2Q6PJF5 856 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 UNQ6494/PRO21346Q6UXR6 183 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 TTC30AQ86WT1 665 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 CBWD2Q8IUF1 395 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 RLN3Q8WXF3 142 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 PIGKQ92643 395 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 NME7Q9Y5B8 376 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 CACNA1EQ15878 2313 aa23.22■■□□□ 1.31
CLIC4-204ENST00000497755 SPEGQ15772 3267 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 WDFY3Q8IZQ1 3526 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 A0A087X0B3 334 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 A0A0A0MRY4 1105 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 VPS37CA5D8V6 355 aaPredicted RBP23.21■■□□□ 1.31
CLIC4-204ENST00000497755 KIAA0391O15091 583 aaKnown RBP23.21■■□□□ 1.31
CLIC4-204ENST00000497755 TOP3BO95985 862 aaKnown RBP23.21■■□□□ 1.31
CLIC4-204ENST00000497755 SPINK2P20155 84 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 ANXA13P27216 316 aa23.21■■□□□ 1.31
CLIC4-204ENST00000497755 TXLNAP40222 546 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms