RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 MYF5P13349 255 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 ZFXP17010 805 aaPredicted RBP3.98□□□□□ -1.77
PSPC1-205ENST00000497722 ABCG1P45844 678 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 GCLCP48506 637 aaPredicted RBP3.98□□□□□ -1.77
PSPC1-205ENST00000497722 PXNP49023 591 aaPredicted RBP3.98□□□□□ -1.77
PSPC1-205ENST00000497722 ZNF134P52741 427 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 PRKAG1P54619 331 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 UCP3P55916 312 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 OS9Q13438 667 aaPredicted RBP3.98□□□□□ -1.77
PSPC1-205ENST00000497722 BMPR2Q13873 1038 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 MGAT5BQ3V5L5 792 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 COL23A1Q86Y22 540 aaPredicted RBP3.98□□□□□ -1.77
PSPC1-205ENST00000497722 PJA1Q8NG27 643 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 SCARB1Q8WTV0 552 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 DDB2Q92466 427 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 APIPQ96GX9 242 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 C22orf23Q9BZE7 217 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 ZNF518BQ9C0D4 1074 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 MS4A7Q9GZW8 240 aaPredicted RBP3.98□□□□□ -1.77
PSPC1-205ENST00000497722 XPR1Q9UBH6 696 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 ZNF70Q9UC06 446 aaPredicted RBP3.98□□□□□ -1.77
PSPC1-205ENST00000497722 MED16Q9Y2X0 877 aa3.98□□□□□ -1.77
PSPC1-205ENST00000497722 TARM1B6A8C7 271 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 TBX3O15119 743 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 PMM2O15305 246 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 PDHA1P08559 390 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 CYP2C9P11712 490 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 TRIM27P14373 513 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 PHKG2P15735 406 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 RPL17P18621 184 aaKnown RBP3.97□□□□□ -1.77
PSPC1-205ENST00000497722 EN2P19622 333 aaPredicted RBP3.97□□□□□ -1.77
PSPC1-205ENST00000497722 CD6P30203 668 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 SLC11A2P49281 568 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 CCT8P50990 548 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 GRM1Q13255 1194 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 CTBP1Q13363 440 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 SEMA5AQ13591 1074 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 TBCCQ15814 346 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 C3orf38Q5JPI3 329 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 KIAA1614Q5VZ46 1190 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 IL31Q6EBC2 164 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 ZNF425Q6IV72 752 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 SWSAP1Q6NVH7 229 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 TMEM108Q6UXF1 575 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 ZNF782Q6ZMW2 699 aaPredicted RBP3.97□□□□□ -1.77
PSPC1-205ENST00000497722 ZNF551Q7Z340 670 aaPredicted RBP3.97□□□□□ -1.77
PSPC1-205ENST00000497722 MAVSQ7Z434 540 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 C11orf96Q7Z7L8 435 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 MRGPRX1Q96LB2 322 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 NELL2Q99435 816 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 KRTAP1-5Q9BYS1 174 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 TRIM54Q9BYV2 358 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 ATP6V0A4Q9HBG4 840 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 A1CFQ9NQ94 594 aaKnown RBP3.97□□□□□ -1.77
PSPC1-205ENST00000497722 HESX1Q9UBX0 185 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 SSX2IPQ9Y2D8 614 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 CEP83Q9Y592 693 aa3.97□□□□□ -1.77
PSPC1-205ENST00000497722 FOXN3O00409 490 aaPredicted RBP3.96□□□□□ -1.78
PSPC1-205ENST00000497722 APAF1O14727 1248 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 IKBKBO14920 756 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 PPM1DO15297 605 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 FRS3O43559 492 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 RGS10O43665 173 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 HNRNPCP07910 306 aaKnown RBP eCLIP3.96□□□□□ -1.781e-6■□□□□ 8.5
PSPC1-205ENST00000497722 PARP1P09874 1014 aaKnown RBP3.96□□□□□ -1.78
PSPC1-205ENST00000497722 NHLRC4P0CG21 123 aaPredicted RBP3.96□□□□□ -1.78
PSPC1-205ENST00000497722 ARFIP2P53365 341 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 LOXL3P58215 753 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 LILRA4P59901 499 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 SP2Q02086 613 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 LONRF1Q17RB8 773 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 PROSER3Q2NL68 480 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 PLAC9Q5JTB6 97 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 ARHGAP40Q5TG30 622 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 CACHD1Q5VU97 1274 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 SFRP4Q6FHJ7 346 aaPredicted RBP3.96□□□□□ -1.78
PSPC1-205ENST00000497722 LIX1LQ8IVB5 337 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.96□□□□□ -1.78
PSPC1-205ENST00000497722 PARD3BQ8TEW8 1205 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 SPSB4Q96A44 273 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 PPP1R9BQ96SB3 815 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 TBCBQ99426 244 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 ARNT2Q9HBZ2 717 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 ARHGEF3Q9NR81 526 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 DLL3Q9NYJ7 618 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 RNF7Q9UBF6 113 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 CCNL1Q9UK58 526 aaPredicted RBP3.96□□□□□ -1.78
PSPC1-205ENST00000497722 PADI4Q9UM07 663 aa3.96□□□□□ -1.78
PSPC1-205ENST00000497722 POM121BA6NF01 834 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 H0YIZ8 118 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 PYCARD-AS1I3L0S3 204 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 KPNA5O15131 536 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 RASAL1O95294 804 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 EBLN1P0CF75 366 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 LRPAP1P30533 357 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 LIPAP38571 399 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 VIPR2P41587 438 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 ZNF81P51508 661 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 NEK3P51956 506 aa3.95□□□□□ -1.78
PSPC1-205ENST00000497722 ITGA8P53708 1063 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms