RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 MEA1Q16626 185 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 SYCE2Q6PIF2 218 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 SMG7Q92540 1137 aaKnown RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 SYN2Q92777 582 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 SECISBP2LQ93073 1101 aaKnown RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 SPATA17Q96L03 361 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 CEP295NLQ96MC4 621 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 TMEM30AQ9NV96 361 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 PCDHGC3Q9UN70 934 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 H3BQ06 376 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 XPO1O14980 1071 aaKnown RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 MFAP3LO75121 409 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 CSH1P0DML2 217 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 CSH2P0DML3 217 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 CDR2Q01850 454 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 ITIH3Q06033 890 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 KLHL30Q0D2K2 578 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 IFRD2Q12894 506 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 TBX2Q13207 712 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 TDRD12Q587J7 1177 aaKnown RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 DENND5BQ6ZUT9 1274 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 IRF2BP2Q7Z5L9 587 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 PASD1Q8IV76 773 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 STKLD1Q8NE28 680 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 ZMIZ2Q8NF64 920 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 SLC20A1Q8WUM9 679 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 ANP32BQ92688 251 aaKnown RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 PSMG2Q969U7 264 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 PNPLA8Q9NP80 782 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 SEPT11Q9NVA2 429 aaKnown RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 ZNHIT6Q9NWK9 470 aaKnown RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 EHD2Q9NZN4 543 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 CD207Q9UJ71 328 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 NOCTQ9UK39 431 aaKnown RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 MAGED2Q9UNF1 606 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-223ENST00000494123 COG5Q9UP83 839 aa15.39■□□□□ 0.05
BRCA1-223ENST00000494123 PATJQ8NI35 1801 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 SLC38A8A6NNN8 435 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 MMEP08473 750 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 CFHP08603 1231 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 POU2F2P09086 479 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 PTPN2P17706 415 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 ADKP55263 362 aaKnown RBP15.38■□□□□ 0.05
BRCA1-223ENST00000494123 PKDCCQ504Y2 493 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 DENND1BQ6P3S1 775 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 CYP26C1Q6V0L0 522 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 DNAJB7Q7Z6W7 309 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-223ENST00000494123 NUP93Q8N1F7 819 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 SPC24Q8NBT2 197 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 OR8K1Q8NGG5 319 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 DDX1Q92499 740 aaKnown RBP15.38■□□□□ 0.05
BRCA1-223ENST00000494123 ZNF707Q96C28 371 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-223ENST00000494123 MSLNLQ96KJ4 702 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 CORO1BQ9BR76 489 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 ADAM7Q9H2U9 754 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 ASAH2Q9NR71 780 aa15.38■□□□□ 0.05
BRCA1-223ENST00000494123 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-223ENST00000494123 RTN3O95197 1032 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-223ENST00000494123 PRKCIP41743 596 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 PLA2G4AP47712 749 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 SLC5A3P53794 718 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 GOLGA8FQ08AF8 430 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 GOLGA8DPQ0D2H9 430 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 MTMR3Q13615 1198 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 ATAT1Q5SQI0 421 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 E4F1Q66K89 784 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-223ENST00000494123 GRASPQ7Z6J2 395 aaPredicted RBP15.37■□□□□ 0.05
BRCA1-223ENST00000494123 GPR149Q86SP6 731 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 PIGZQ86VD9 579 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 RIPOR3Q96MK2 946 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 NOX5Q96PH1 765 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 DNAJC7Q99615 494 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 AGPAT1Q99943 283 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 UBXN6Q9BZV1 441 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 LHX5Q9H2C1 402 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 HAUS4Q9H6D7 363 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 LRRC4Q9HBW1 653 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 ST7Q9NRC1 585 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 ABHD10Q9NUJ1 306 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 HCFC1R1Q9NWW0 138 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 BZW2Q9Y6E2 419 aaKnown RBP15.37■□□□□ 0.05
BRCA1-223ENST00000494123 BRWD1Q9NSI6 2320 aa15.37■□□□□ 0.05
BRCA1-223ENST00000494123 C2orf16Q68DN1 1984 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 TULP2O00295 520 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 LSM8O95777 96 aaKnown RBP15.36■□□□□ 0.05
BRCA1-223ENST00000494123 SERPING1P05155 500 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 SKILP12757 684 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 GPD2P43304 727 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 RGS7P49802 495 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 PABPC1LQ4VXU2 614 aaKnown RBP15.36■□□□□ 0.05
BRCA1-223ENST00000494123 CYP4A22Q5TCH4 519 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 TRIM72Q6ZMU5 477 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 PDZD4Q76G19 769 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-223ENST00000494123 VPS36Q86VN1 386 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 SMRP1Q8NCR6 262 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 TMEM35BQ8NCS4 154 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 C1orf131Q8NDD1 294 aaKnown RBP15.36■□□□□ 0.05
BRCA1-223ENST00000494123 SLC35F5Q8WV83 523 aa15.36■□□□□ 0.05
BRCA1-223ENST00000494123 S1PR5Q9H228 398 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms