RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ZDHHC18Q9NUE0 388 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.01■■□□□ 1.43
USF3-203ENST00000491165 CTTNBP2NLQ9P2B4 639 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 KANSL3Q9P2N6 904 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 RASAL2Q9UJF2 1139 aa24.01■■□□□ 1.43
USF3-203ENST00000491165 PDE4DIPQ5VU43 2346 aa24■■□□□ 1.43
USF3-203ENST00000491165 GJB5O95377 273 aa24■■□□□ 1.43
USF3-203ENST00000491165 PAEPP09466 180 aa24■■□□□ 1.43
USF3-203ENST00000491165 RAP1GAPP47736 663 aa24■■□□□ 1.43
USF3-203ENST00000491165 TCEAL1Q15170 157 aa24■■□□□ 1.43
USF3-203ENST00000491165 LRRC52Q8N7C0 313 aa24■■□□□ 1.43
USF3-203ENST00000491165 SDCBP2Q9H190 292 aa24■■□□□ 1.43
USF3-203ENST00000491165 GBF1Q92538 1859 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 FTLP02792 175 aaPredicted RBP23.99■■□□□ 1.43
USF3-203ENST00000491165 CDH8P55286 799 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 RASIP1Q5U651 963 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 TMEM173Q86WV6 379 aaPredicted RBP23.99■■□□□ 1.43
USF3-203ENST00000491165 JAMLQ86YT9 394 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 SUGP1Q8IWZ8 645 aaKnown RBP23.99■■□□□ 1.43
USF3-203ENST00000491165 SMYD3Q9H7B4 428 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 CNOT8Q9UFF9 292 aaKnown RBP23.99■■□□□ 1.43
USF3-203ENST00000491165 WEE2P0C1S8 567 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 ATICP31939 592 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 GCNT1Q02742 428 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 CUL2Q13617 745 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 ZNF667Q5HYK9 610 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 FBXW10Q5XX13 1052 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 HOOK3Q86VS8 718 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 CNPY4Q8N129 248 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 CWH43Q9H720 699 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 SNX9Q9Y5X1 595 aa23.99■■□□□ 1.43
USF3-203ENST00000491165 SZT2Q5T011 3432 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 NT5C1B-RDH14C9J2C7 533 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 I3L4J1 428 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 PHF2O75151 1096 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 B3GAT3O94766 335 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 STAU1O95793 577 aaKnown RBP23.98■■□□□ 1.43
USF3-203ENST00000491165 FNTAP49354 379 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 DRG2P55039 364 aaKnown RBP23.98■■□□□ 1.43
USF3-203ENST00000491165 GPC5P78333 572 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 RNF187Q5TA31 235 aaPredicted RBP23.98■■□□□ 1.43
USF3-203ENST00000491165 LRRC43Q8N309 656 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 NIF3L1Q9GZT8 377 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 PRG3Q9Y2Y8 225 aaPredicted RBP23.98■■□□□ 1.43
USF3-203ENST00000491165 KPNA7A9QM74 516 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 OR1G1P47890 313 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 TAF6P49848 677 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 CDR1P51861 262 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 SHHQ15465 462 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 FAM109BQ6ICB4 259 aaPredicted RBP23.98■■□□□ 1.43
USF3-203ENST00000491165 CNOT10Q9H9A5 744 aaKnown RBP23.98■■□□□ 1.43
USF3-203ENST00000491165 SLC4A7Q9Y6M7 1214 aa23.98■■□□□ 1.43
USF3-203ENST00000491165 TSC2P49815 1807 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 H0YHG0 523 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 CHRNA3P32297 505 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 RPL9P32969 192 aaKnown RBP23.97■■□□□ 1.43
USF3-203ENST00000491165 BRCC3P46736 316 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 MYO1EQ12965 1108 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 IFT88Q13099 833 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 C6orf89Q6UWU4 347 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 TLCD1Q96CP7 247 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 FAM193BQ96PV7 902 aaPredicted RBP23.97■■□□□ 1.43
USF3-203ENST00000491165 ZSWIM1Q9BR11 485 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 MRPL9Q9BYD2 267 aaKnown RBP23.97■■□□□ 1.43
USF3-203ENST00000491165 BCO2Q9BYV7 579 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 ACP6Q9NPH0 428 aa23.97■■□□□ 1.43
USF3-203ENST00000491165 NRP1O14786 923 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 RTN2O75298 545 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 NUDT17P0C025 328 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 ACO1P21399 889 aaKnown RBP23.96■■□□□ 1.43
USF3-203ENST00000491165 SLC11A1P49279 550 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 PMS2P54278 862 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 TIGD5Q53EQ6 642 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 RAPGEF5Q92565 580 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 NME7Q9Y5B8 376 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 VWA8A3KMH1 1905 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 CD58P19256 250 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 PLTPP55058 493 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 HTRA4P83105 476 aaPredicted RBP23.96■■□□□ 1.43
USF3-203ENST00000491165 PPARDQ03181 441 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 SOWAHAQ2M3V2 549 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 UBR7Q8N806 425 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 SHC3Q92529 594 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 KRT35Q92764 455 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 C18orf8Q96DM3 657 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 ZNF560Q96MR9 790 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 YME1L1Q96TA2 773 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 PABPC3Q9H361 631 aaKnown RBP23.96■■□□□ 1.43
USF3-203ENST00000491165 MARCH5Q9NX47 278 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 HMGXB4Q9UGU5 601 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 SNX24Q9Y343 169 aa23.96■■□□□ 1.43
USF3-203ENST00000491165 MRPL42Q9Y6G3 142 aaKnown RBP23.96■■□□□ 1.43
USF3-203ENST00000491165 LCHNA4D1U4 455 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 TMEM110-MUSTN1A8MSY1 372 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 CALCAP01258 141 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 GALTP07902 379 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 ATP2A2P16615 1042 aaKnown RBP23.95■■□□□ 1.42
USF3-203ENST00000491165 HNRNPH1P31943 449 aaKnown RBP23.95■■□□□ 1.42
USF3-203ENST00000491165 GBP1P32455 592 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 AADACL2Q6P093 401 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms