RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 GZMAP12544 262 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 EPCAMP16422 314 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 POU3F3P20264 500 aaPredicted RBP18.56■□□□□ 0.56
CHMP3-207ENST00000485465 CYLC1P35663 651 aaPredicted RBP18.56■□□□□ 0.56
CHMP3-207ENST00000485465 PLA2G4AP47712 749 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 GPR15P49685 360 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 CCZ1BP86790 482 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 CCZ1P86791 482 aaPredicted RBP18.56■□□□□ 0.56
CHMP3-207ENST00000485465 CENPCQ03188 943 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 GFPT1Q06210 699 aaPredicted RBP18.56■□□□□ 0.56
CHMP3-207ENST00000485465 ADGRE1Q14246 886 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 TCEAL5Q5H9L2 206 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 ACAD10Q6JQN1 1059 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 PMF1Q6P1K2 205 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 RAD9BQ6WBX8 426 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 CCDC149Q6ZUS6 474 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 PIGZQ86VD9 579 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 STK32AQ8WU08 396 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 HDAC7Q8WUI4 952 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 NOX5Q96PH1 765 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 PLEKHA4Q9H4M7 779 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 PNPLA8Q9NP80 782 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 SPTLC3Q9NUV7 552 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 TAS2R14Q9NYV8 317 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 NAGPAQ9UK23 515 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 NENFQ9UMX5 172 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 YIPF1Q9Y548 306 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 MTCH2Q9Y6C9 303 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 EPN1Q9Y6I3 576 aaPredicted RBP18.56■□□□□ 0.56
CHMP3-207ENST00000485465 ATG2AQ2TAZ0 1938 aa18.56■□□□□ 0.56
CHMP3-207ENST00000485465 TRANK1O15050 2925 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 NRDCO43847 1150 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 ALDH1A3P47895 512 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 RPL34P49207 117 aaKnown RBP18.55■□□□□ 0.56
CHMP3-207ENST00000485465 RGS7P49802 495 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 PDCLQ13371 301 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 MTF1Q14872 753 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 CCDC122Q5T0U0 273 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 LIN9Q5TKA1 542 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 SDHAF4Q5VUM1 108 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 RTL10Q7L3V2 364 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 SLC7A14Q8TBB6 771 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 KCTD13Q8WZ19 329 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 PPP1R13BQ96KQ4 1090 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 SPATA17Q96L03 361 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 HSFY1Q96LI6 401 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 CEP295NLQ96MC4 621 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 SLC4A5Q9BY07 1137 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 MAN1C1Q9NR34 630 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 DPP7Q9UHL4 492 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 INSL5Q9Y5Q6 135 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 HCFC2Q9Y5Z7 792 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 PTPRDP23468 1912 aa18.55■□□□□ 0.56
CHMP3-207ENST00000485465 PLXNA3P51805 1871 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 FAM170AA1A519 330 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 TMCO5BA8MYB1 307 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 EIF3CLB5ME19 914 aaKnown RBP18.54■□□□□ 0.56
CHMP3-207ENST00000485465 TNFRSF10BO14763 440 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 ARHGAP6O43182 974 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 RTN2O75298 545 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 NDUFA10O95299 355 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 C8AP07357 584 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 ATF6P18850 670 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 GTF2F1P35269 517 aaKnown RBP eCLIP18.54■□□□□ 0.56
CHMP3-207ENST00000485465 NSFP46459 744 aaKnown RBP18.54■□□□□ 0.56
CHMP3-207ENST00000485465 TWF1Q12792 350 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 HYAL1Q12794 435 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 KCNC3Q14003 757 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 PPP1R2P3Q6NXS1 205 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 LLGL2Q6P1M3 1020 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 ALKBH5Q6P6C2 394 aaKnown RBP18.54■□□□□ 0.56
CHMP3-207ENST00000485465 ERICH1Q86X53 443 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 PHF13Q86YI8 300 aaPredicted RBP18.54■□□□□ 0.56
CHMP3-207ENST00000485465 ZNF830Q96NB3 372 aaPredicted RBP18.54■□□□□ 0.56
CHMP3-207ENST00000485465 CPXM1Q96SM3 734 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 GAS2L1Q99501 681 aaPredicted RBP18.54■□□□□ 0.56
CHMP3-207ENST00000485465 EIF3CQ99613 913 aaKnown RBP18.54■□□□□ 0.56
CHMP3-207ENST00000485465 ISCUQ9H1K1 167 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 KCNF1Q9H3M0 494 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 IGFLR1Q9H665 355 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 CYLDQ9NQC7 956 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 ST7Q9NRC1 585 aa18.54■□□□□ 0.56
CHMP3-207ENST00000485465 ZNF263O14978 683 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 ZMYND10O75800 440 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 GABBR2O75899 941 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 LCA5LO95447 670 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 FTLP02792 175 aaPredicted RBP18.53■□□□□ 0.56
CHMP3-207ENST00000485465 IGFBP4P22692 258 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 MMP8P22894 467 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 ACADSBP45954 432 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 PLD1Q13393 1074 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 PTPN20Q4JDL3 420 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 RAB41Q5JT25 222 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 PPM1LQ5SGD2 360 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 ELMSAN1Q6PJG2 1045 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 GPRIN1Q7Z2K8 1008 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 TMEM110Q86TL2 294 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 NUP93Q8N1F7 819 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 MSANTD4Q8NCY6 345 aa18.53■□□□□ 0.56
CHMP3-207ENST00000485465 VN1R2Q8NFZ6 395 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms