RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PKN3Q6P5Z2 889 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-206ENST00000484733 NELFCDQ8IXH7 590 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 RDH13Q8NBN7 331 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 SH3RF2Q8TEC5 729 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 CD101Q93033 1021 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 SYAP1Q96A49 352 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-206ENST00000484733 RCOR1Q9UKL0 485 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 NME7Q9Y5B8 376 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 DLATP10515 647 aaKnown RBP12.22□□□□□ -0.45
SCFD1-206ENST00000484733 PTPN1P18031 435 aaKnown RBP12.22□□□□□ -0.45
SCFD1-206ENST00000484733 TNNC1P63316 161 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 CLDN10P78369 228 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 SLC7A9P82251 487 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 CYP27A1Q02318 531 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 SRSF5Q13243 272 aaKnown RBP12.22□□□□□ -0.45
SCFD1-206ENST00000484733 KCNB1Q14721 858 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 CEP68Q76N32 757 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 FAM160A2Q8N612 972 aaPredicted RBP12.22□□□□□ -0.45
SCFD1-206ENST00000484733 CCDC26Q8TAB7 109 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 XYLT2Q9H1B5 865 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 BLZF1Q9H2G9 400 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 FBRSL1Q9HCM7 1045 aaKnown RBP12.22□□□□□ -0.45
SCFD1-206ENST00000484733 SEMA4GQ9NTN9 838 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 DMAC2Q9NW81 257 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 CFAP45Q9UL16 551 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 CACNA1AO00555 2505 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 GPR179Q6PRD1 2367 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 ZNF840PA6NDX5 716 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 SLC30A4O14863 429 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 RNF40O75150 1001 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 OLFM2O95897 454 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 PSMD2Q13200 908 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 TRPC3Q13507 836 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 CUL4BQ13620 913 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 MDH1BQ5I0G3 518 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 PRR23CQ6ZRP0 262 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 CACNA2D4Q7Z3S7 1137 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 SLC9A9Q8IVB4 645 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 OR6B3Q8NGW1 331 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 ELOVL4Q9GZR5 314 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 SLC39A2Q9NP94 309 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 WNT6Q9Y6F9 365 aa12.22□□□□□ -0.45
SCFD1-206ENST00000484733 KLRC4O43908 158 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 NFATC1O95644 943 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 SLFN14P0C7P3 912 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 RAP1GAPP47736 663 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 USP46P62068 366 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 WDR72Q3MJ13 1102 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 SYT13Q7L8C5 426 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 HSCBQ8IWL3 235 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 OVCA2Q8WZ82 227 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 CCDC127Q96BQ5 260 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 ZC3H10Q96K80 434 aaKnown RBP12.21□□□□□ -0.45
SCFD1-206ENST00000484733 COMMD8Q9NX08 183 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 USP25Q9UHP3 1055 aa12.21□□□□□ -0.45
SCFD1-206ENST00000484733 EPN2O95208 641 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 CASP1P29466 404 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 ME1P48163 572 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 MYL6P60660 151 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 TDRD10Q5VZ19 366 aaKnown RBP12.21□□□□□ -0.46
SCFD1-206ENST00000484733 CEP57L1Q8IYX8 460 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 PARD3BQ8TEW8 1205 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 EZH1Q92800 747 aaPredicted RBP12.21□□□□□ -0.46
SCFD1-206ENST00000484733 ACDQ96AP0 544 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 B3GNT5Q9BYG0 378 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 LINC00597Q9H2U6 94 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 EBF1Q9UH73 591 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.21□□□□□ -0.46
SCFD1-206ENST00000484733 MYO16Q9Y6X6 1858 aa12.21□□□□□ -0.46
SCFD1-206ENST00000484733 A8MXQ7 604 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 F8VP50 259 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 LEFTY2O00292 366 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 EXOC3O60645 756 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 RPP40O75818 363 aaKnown RBP12.2□□□□□ -0.46
SCFD1-206ENST00000484733 OAS1P00973 400 aaKnown RBP12.2□□□□□ -0.46
SCFD1-206ENST00000484733 C4BPAP04003 597 aaKnown RBP12.2□□□□□ -0.46
SCFD1-206ENST00000484733 HOXC13P31276 330 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 AFMP43652 599 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 ZXDBP98169 803 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-206ENST00000484733 B3GALNT2Q8NCR0 500 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 PLEKHO2Q8TD55 490 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-206ENST00000484733 IL37Q9NZH6 218 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 SERTAD1Q9UHV2 236 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 ATP8B3O60423 1300 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 DCHS1Q96JQ0 3298 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 SLC9A3R1O14745 358 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-206ENST00000484733 ACTN4O43707 911 aaKnown RBP12.2□□□□□ -0.46
SCFD1-206ENST00000484733 RTN3O95197 1032 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-206ENST00000484733 MYL1P05976 194 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 LIMK1P53667 647 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 GAB4Q2WGN9 574 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 SNX30Q5VWJ9 437 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 DDX42Q86XP3 938 aaKnown RBP eCLIP12.2□□□□□ -0.46
SCFD1-206ENST00000484733 PDZD8Q8NEN9 1154 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 PAGE5Q96GU1 130 aa12.2□□□□□ -0.46
SCFD1-206ENST00000484733 DUSP9Q99956 384 aaKnown RBP12.2□□□□□ -0.46
SCFD1-206ENST00000484733 RNF38Q9H0F5 515 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms