RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 C8orf48Q96LL4 319 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 SLITRK1Q96PX8 696 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 CYP2S1Q96SQ9 504 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 HPS4Q9NQG7 708 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 USP18Q9UMW8 372 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 SLC8A2Q9UPR5 921 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 FRMD4BQ9Y2L6 1034 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 A0A1B0GVL5 298 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 CHURC1-FNTBB4DL54 471 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 F8VP50 259 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 PDXKO00764 312 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 ACTN4O43707 911 aaKnown RBP12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 TADA3O75528 432 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 NFATC1O95644 943 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 ABL1P00519 1130 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 TCF3P15923 654 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 PFKFB1P16118 471 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 HOXA6P31267 233 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 SYKP43405 635 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 FNTBP49356 437 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 NOP14P78316 857 aaKnown RBP12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 STK4Q13043 487 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 NCOA4Q13772 614 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 ZNF77Q15935 545 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 CCDC142Q17RM4 750 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 KMT5BQ4FZB7 885 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 HEATR6Q6AI08 1181 aaKnown RBP12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 CEP68Q76N32 757 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 DGLUCYQ7Z3D6 616 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 SLC9A9Q8IVB4 645 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 B3GALNT2Q8NCR0 500 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 PDZD8Q8NEN9 1154 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 SH3RF2Q8TEC5 729 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 PARD3BQ8TEW8 1205 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 RMDN1Q96DB5 314 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 P2RY13Q9BPV8 354 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 DNAI2Q9GZS0 605 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 SCAND2PQ9GZW5 306 aaPredicted RBP12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 ECT2Q9H8V3 914 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 VRTNQ9H8Y1 702 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 ARHGAP26Q9UNA1 814 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 GPR179Q6PRD1 2367 aa12.72□□□□□ -0.37
SNRNP200-206ENST00000484372 C2orf78A6NCI8 922 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 K7ESF4 209 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 SLC9A3R1O14745 358 aaPredicted RBP12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 KLRC4O43908 158 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 FOXD2O60548 495 aaPredicted RBP12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 RTN3O95197 1032 aaPredicted RBP12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 RPN1P04843 607 aaKnown RBP12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 RETP07949 1114 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 ARSAP15289 507 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 GJA4P35212 333 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 USP4Q13107 963 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 SGSM1Q2NKQ1 1148 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 CEP135Q66GS9 1140 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 DDX42Q86XP3 938 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 KIAA1958Q8N8K9 716 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 TMEM174Q8WUU8 243 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 ZNF516Q92618 1163 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 TAF4BQ92750 862 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 CD101Q93033 1021 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 CHAMP1Q96JM3 812 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 MED10Q9BTT4 135 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 TTLL2Q9BWV7 592 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 GCNT4Q9P109 453 aa12.71□□□□□ -0.37
SNRNP200-206ENST00000484372 ZNF292O60281 2723 aa12.71□□□□□ -0.38
SNRNP200-206ENST00000484372 DENND4CQ5VZ89 1909 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 CCDC163A0A0D9SF12 145 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 ZNF840PA6NDX5 716 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 LRRIQ3A6PVS8 624 aaPredicted RBP12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 IKBKBO14920 756 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 LRP3O75074 770 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 NR3C1P04150 777 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 YWHAQP27348 245 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 CASP4P49662 377 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 GALK1P51570 392 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 CLDN10P78369 228 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 IFRD2Q12894 506 aaPredicted RBP12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 LPAL2Q16609 132 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 RSPO4Q2I0M5 234 aaPredicted RBP12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 FSTL4Q6MZW2 842 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 WDR5BQ86VZ2 330 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 NUP93Q8N1F7 819 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 CAMKK1Q8N5S9 505 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 KIAA0895Q8NCT3 520 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 CCDC150Q8NCX0 1101 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 ACDQ96AP0 544 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 SLC22A12Q96S37 553 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 IMPG2Q9BZV3 1241 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 XYLT2Q9H1B5 865 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 DMAC2Q9NW81 257 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 CDV3Q9UKY7 258 aaKnown RBP12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 WNT6Q9Y6F9 365 aa12.7□□□□□ -0.38
SNRNP200-206ENST00000484372 OTOL1A6NHN0 477 aaPredicted RBP12.69□□□□□ -0.38
SNRNP200-206ENST00000484372 LEFTY2O00292 366 aa12.69□□□□□ -0.38
SNRNP200-206ENST00000484372 HRO43593 1189 aa12.69□□□□□ -0.38
SNRNP200-206ENST00000484372 RNF40O75150 1001 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms