RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 SLC20A1Q8WUM9 679 aa21.91■■□□□ 1.1
VPS16-207ENST00000481812 HSFY1Q96LI6 401 aa21.91■■□□□ 1.1
VPS16-207ENST00000481812 SEPT5Q99719 369 aaPredicted RBP21.91■■□□□ 1.1
VPS16-207ENST00000481812 PDCL3Q9H2J4 239 aa21.91■■□□□ 1.1
VPS16-207ENST00000481812 IGFLR1Q9H665 355 aa21.91■■□□□ 1.1
VPS16-207ENST00000481812 ARHGAP20Q9P2F6 1191 aa21.91■■□□□ 1.1
VPS16-207ENST00000481812 SZT2Q5T011 3432 aa21.91■■□□□ 1.1
VPS16-207ENST00000481812 F8VP50 259 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 BEST1O76090 585 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 GLP2RO95838 553 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 CYP1A1P04798 512 aaPredicted RBP21.9■■□□□ 1.1
VPS16-207ENST00000481812 CFHP08603 1231 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 SKILP12757 684 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 TNFAIP3P21580 790 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 RPL34P49207 117 aaKnown RBP21.9■■□□□ 1.1
VPS16-207ENST00000481812 MAP3K7CLP57077 242 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 TDRD12Q587J7 1177 aaKnown RBP21.9■■□□□ 1.1
VPS16-207ENST00000481812 PPM1LQ5SGD2 360 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 TAF3Q5VWG9 929 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 PPP1R2P3Q6NXS1 205 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 DENND1BQ6P3S1 775 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 CYP26C1Q6V0L0 522 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 VPS36Q86VN1 386 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 SCN4BQ8IWT1 228 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 UBA3Q8TBC4 463 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 KCTD13Q8WZ19 329 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 KCNK16Q96T55 309 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 COMMD8Q9NX08 183 aa21.9■■□□□ 1.1
VPS16-207ENST00000481812 ZNF638Q14966 1978 aaKnown RBP21.9■■□□□ 1.1
VPS16-207ENST00000481812 HHLA1C9JL84 531 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 LRG1P02750 347 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 FOSL2P15408 326 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 HOXB8P17481 243 aaPredicted RBP21.89■■□□□ 1.09
VPS16-207ENST00000481812 ATF6P18850 670 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 EPHB3P54753 998 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 DDR2Q16832 855 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 LLGL2Q6P1M3 1020 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 WDTC1Q8N5D0 677 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 SLC30A5Q8TAD4 765 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 OLIG1Q8TAK6 271 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 SECISBP2LQ93073 1101 aaKnown RBP21.89■■□□□ 1.09
VPS16-207ENST00000481812 PABPC5Q96DU9 382 aaKnown RBP21.89■■□□□ 1.09
VPS16-207ENST00000481812 SFXN1Q9H9B4 322 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 IL37Q9NZH6 218 aa21.89■■□□□ 1.09
VPS16-207ENST00000481812 TNFRSF10BO14763 440 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 CSH1P0DML2 217 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 CSH2P0DML3 217 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 GZMAP12544 262 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 UNGP13051 313 aaPredicted RBP21.88■■□□□ 1.09
VPS16-207ENST00000481812 CDR1P51861 262 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 NOMO3P69849 1222 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 TWF1Q12792 350 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 VEPH1Q14D04 833 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 RAB41Q5JT25 222 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 CCDC186Q7Z3E2 898 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 ITIH5Q86UX2 942 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 PIGZQ86VD9 579 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 GPIHBP1Q8IV16 184 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 NUP93Q8N1F7 819 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 NOX5Q96PH1 765 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 PRKD2Q9BZL6 878 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 EHD2Q9NZN4 543 aa21.88■■□□□ 1.09
VPS16-207ENST00000481812 XYLBO75191 536 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 SOAT2O75908 522 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 RTN3O95197 1032 aaPredicted RBP21.87■■□□□ 1.09
VPS16-207ENST00000481812 SSTR3P32745 418 aaPredicted RBP21.87■■□□□ 1.09
VPS16-207ENST00000481812 ACADSBP45954 432 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 SNX16P57768 344 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 CLEC16AQ2KHT3 1053 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 ASTE1Q2TB18 679 aaPredicted RBP21.87■■□□□ 1.09
VPS16-207ENST00000481812 ANKRD54Q6NXT1 300 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 PMF1Q6P1K2 205 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 DENND5BQ6ZUT9 1274 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 TMTC1Q8IUR5 882 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 ELMOD1Q8N336 334 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 PSMG2Q969U7 264 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 PCDHB18PQ96TA0 734 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 CHP1Q99653 195 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 TTLL2Q9BWV7 592 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 SLC4A5Q9BY07 1137 aa21.87■■□□□ 1.09
VPS16-207ENST00000481812 TULP2O00295 520 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 DDX3XO00571 662 aaKnown RBP eCLIP21.86■■□□□ 1.09
VPS16-207ENST00000481812 LINC01565O15544 149 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 PLEKP08567 350 aaPredicted RBP21.86■■□□□ 1.09
VPS16-207ENST00000481812 EIF4A3P38919 411 aaKnown RBP21.86■■□□□ 1.09
VPS16-207ENST00000481812 GPR15P49685 360 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 KIF11P52732 1056 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 RBM10P98175 930 aaKnown RBP21.86■■□□□ 1.09
VPS16-207ENST00000481812 CENPCQ03188 943 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 TMEM110Q86TL2 294 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 PASD1Q8IV76 773 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 SCML4Q8N228 414 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 TRMT2BQ96GJ1 504 aaKnown RBP21.86■■□□□ 1.09
VPS16-207ENST00000481812 MYRFLQ96LU7 910 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 ZNF512Q96ME7 567 aaPredicted RBP21.86■■□□□ 1.09
VPS16-207ENST00000481812 MIS12Q9H081 205 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 NHEJ1Q9H9Q4 299 aaPredicted RBP21.86■■□□□ 1.09
VPS16-207ENST00000481812 CYTH4Q9UIA0 394 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 USP3Q9Y6I4 520 aa21.86■■□□□ 1.09
VPS16-207ENST00000481812 CCDC195A0A1B0GUA6 201 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms