RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TMEM196Q5HYL7 178 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 SCARA5Q6ZMJ2 495 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 PRR23BQ6ZRT6 265 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 DENND5BQ6ZUT9 1274 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 SH3RF2Q8TEC5 729 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 PARD3BQ8TEW8 1205 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 B3GNT5Q9BYG0 378 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 ZNF518BQ9C0D4 1074 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 LINC00597Q9H2U6 94 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 KCTD10Q9H3F6 313 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 POLR3BQ9NW08 1133 aaPredicted RBP19.79■□□□□ 0.76
CLK1-211ENST00000481641 DUS2Q9NX74 493 aaKnown RBP19.79■□□□□ 0.76
CLK1-211ENST00000481641 HPSEQ9Y251 543 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 TRDMT1O14717 391 aaKnown RBP19.78■□□□□ 0.76
CLK1-211ENST00000481641 TRIM66O15016 1216 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 VNN1O95497 513 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 STAU1O95793 577 aaKnown RBP19.78■□□□□ 0.76
CLK1-211ENST00000481641 EGFP01133 1207 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 C4BPAP04003 597 aaKnown RBP19.78■□□□□ 0.76
CLK1-211ENST00000481641 ATICP31939 592 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 GALK1P51570 392 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 ZXDBP98169 803 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 IFRD2Q12894 506 aaPredicted RBP19.78■□□□□ 0.76
CLK1-211ENST00000481641 KCNB1Q14721 858 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 PDGFRLQ15198 375 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 GOLGA5Q8TBA6 731 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 OSCP1Q8WVF1 389 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 SYAP1Q96A49 352 aaPredicted RBP19.78■□□□□ 0.76
CLK1-211ENST00000481641 ECT2Q9H8V3 914 aa19.78■□□□□ 0.76
CLK1-211ENST00000481641 PAPSS2O95340 614 aaPredicted RBP19.77■□□□□ 0.76
CLK1-211ENST00000481641 RPN1P04843 607 aaKnown RBP19.77■□□□□ 0.76
CLK1-211ENST00000481641 FAM163BP0C2L3 166 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 GJA4P35212 333 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 IFNAR2P48551 515 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 NDUFA8P51970 172 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 KRT85P78386 507 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 GRSF1Q12849 480 aaKnown RBP eCLIP19.77■□□□□ 0.76
CLK1-211ENST00000481641 PSMD2Q13200 908 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 NCOA4Q13772 614 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 ZNF699Q32M78 642 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 EML3Q32P44 896 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 SYNPOQ8N3V7 929 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 B3GALNT2Q8NCR0 500 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 C8orf48Q96LL4 319 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 SDCBP2Q9H190 292 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 PARD6AQ9NPB6 346 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 TRPM5Q9NZQ8 1165 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 GTF3C3Q9Y5Q9 886 aa19.77■□□□□ 0.76
CLK1-211ENST00000481641 HELZP42694 1942 aaKnown RBP19.76■□□□□ 0.75
CLK1-211ENST00000481641 ABL1P00519 1130 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 NR3C1P04150 777 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 TGM1P22735 817 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 SYKP43405 635 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 PXNP49023 591 aaPredicted RBP19.76■□□□□ 0.75
CLK1-211ENST00000481641 CLDN10P78369 228 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 SIM2Q14190 667 aaPredicted RBP19.76■□□□□ 0.75
CLK1-211ENST00000481641 RSPO4Q2I0M5 234 aaPredicted RBP19.76■□□□□ 0.75
CLK1-211ENST00000481641 ZNF667Q5HYK9 610 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 LONP2Q86WA8 852 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 SLC9A9Q8IVB4 645 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 CPA6Q8N4T0 437 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 SECISBP2LQ93073 1101 aaKnown RBP19.76■□□□□ 0.75
CLK1-211ENST00000481641 P2RY13Q9BPV8 354 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 TTLL2Q9BWV7 592 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 RNF38Q9H0F5 515 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 USP25Q9UHP3 1055 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 GMEB2Q9UKD1 530 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 RAB23Q9ULC3 237 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 ARHGAP26Q9UNA1 814 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 DNAH14Q0VDD8 3507 aa19.76■□□□□ 0.75
CLK1-211ENST00000481641 ZNF840PA6NDX5 716 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 PDXKO00764 312 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 SCAMP3O14828 347 aaKnown RBP19.75■□□□□ 0.75
CLK1-211ENST00000481641 RNF40O75150 1001 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 NOP14P78316 857 aaKnown RBP19.75■□□□□ 0.75
CLK1-211ENST00000481641 TAF10Q12962 218 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 ORC1Q13415 861 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 CEP135Q66GS9 1140 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 EZH1Q92800 747 aaPredicted RBP19.75■□□□□ 0.75
CLK1-211ENST00000481641 CEP295NLQ96MC4 621 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 KCNK16Q96T55 309 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 ELOVL4Q9GZR5 314 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 GOLPH3LQ9H4A5 285 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 VRTNQ9H8Y1 702 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.75■□□□□ 0.753e-7■■■■■ 35.5
CLK1-211ENST00000481641 USP18Q9UMW8 372 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 MAPK8IP1Q9UQF2 711 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 SDK1Q7Z5N4 2213 aa19.75■□□□□ 0.75
CLK1-211ENST00000481641 LEFTY2O00292 366 aa19.74■□□□□ 0.75
CLK1-211ENST00000481641 AP3M2P53677 418 aa19.74■□□□□ 0.75
CLK1-211ENST00000481641 SPEM2Q0P670 501 aa19.74■□□□□ 0.75
CLK1-211ENST00000481641 C1orf220Q5T0J3 134 aa19.74■□□□□ 0.75
CLK1-211ENST00000481641 SPOPLQ6IQ16 392 aa19.74■□□□□ 0.75
CLK1-211ENST00000481641 PAQR9Q6ZVX9 377 aa19.74■□□□□ 0.75
CLK1-211ENST00000481641 ERMP1Q7Z2K6 904 aa19.74■□□□□ 0.75
CLK1-211ENST00000481641 ATP2A3Q93084 1043 aa19.74■□□□□ 0.75
CLK1-211ENST00000481641 MED10Q9BTT4 135 aa19.74■□□□□ 0.75
CLK1-211ENST00000481641 SMPD4Q9NXE4 827 aa19.74■□□□□ 0.75
CLK1-211ENST00000481641 CACNA1AO00555 2505 aa19.73■□□□□ 0.75
CLK1-211ENST00000481641 TCF3P15923 654 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms