RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 GHRHRQ02643 423 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 MTHFD1LQ6UB35 978 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 C9orf47Q6ZRZ4 202 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 SLC15A3Q8IY34 581 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 MTMR8Q96EF0 704 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 TMEM232C9JQI7 657 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 VNN1O95497 513 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 A1BGP04217 495 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 GRPP07492 148 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 CYP19A1P11511 503 aaPredicted RBP4.16□□□□□ -1.74
HPS3-205ENST00000478525 VIPR2P41587 438 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 ITKQ08881 620 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 EMC10Q5UCC4 262 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 DLK2Q6UY11 383 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 BCDIN3DQ7Z5W3 292 aaKnown RBP4.16□□□□□ -1.74
HPS3-205ENST00000478525 MIER2Q8N344 545 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.16□□□□□ -1.74
HPS3-205ENST00000478525 ZNF398Q8TD17 642 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 BRIX1Q8TDN6 353 aaKnown RBP4.16□□□□□ -1.74
HPS3-205ENST00000478525 OSCP1Q8WVF1 389 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 PRR25Q96S07 402 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 CXorf36Q9H7Y0 433 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 PNPOQ9NVS9 261 aa4.16□□□□□ -1.74
HPS3-205ENST00000478525 AP4M1O00189 453 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 DTNBO60941 627 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 TOMM40O96008 361 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 PRKCBP05771 671 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 PDCP20941 246 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 KCNJ5P48544 419 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 SOX8P57073 446 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 PSG6Q00889 435 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 SRSF1Q07955 248 aaKnown RBP eCLIP4.15□□□□□ -1.75
HPS3-205ENST00000478525 MYO1EQ12965 1108 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 ERV3-1Q14264 604 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 AWAT1Q58HT5 328 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 CAND1Q86VP6 1230 aaKnown RBP4.15□□□□□ -1.75
HPS3-205ENST00000478525 CELF5Q8N6W0 485 aaKnown RBP4.15□□□□□ -1.75
HPS3-205ENST00000478525 OSR1Q8TAX0 266 aaPredicted RBP4.15□□□□□ -1.75
HPS3-205ENST00000478525 FAM167AQ96KS9 214 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 LYZL4Q96KX0 146 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 PUS7Q96PZ0 661 aaKnown RBP4.15□□□□□ -1.75
HPS3-205ENST00000478525 FYTTD1Q96QD9 318 aaKnown RBP4.15□□□□□ -1.75
HPS3-205ENST00000478525 DPCDQ9BVM2 203 aaPredicted RBP4.15□□□□□ -1.75
HPS3-205ENST00000478525 SHOC2Q9UQ13 582 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 ATP8A1Q9Y2Q0 1164 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 PLEKHM1Q9Y4G2 1056 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 SNX14Q9Y5W7 946 aa4.15□□□□□ -1.75
HPS3-205ENST00000478525 NOTCH4Q99466 2003 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 FAM90A8PA6NJQ4 464 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 GCATO75600 419 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 FAM90A13PP0C7W8 464 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 FAM90A24PP0C7X0 464 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 PSG1P11464 419 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 THBS4P35443 961 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 GUCY2FP51841 1108 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 ZNF91Q05481 1191 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 SEMA3AQ14563 771 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 PLS1Q14651 629 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 PTPN21Q16825 1174 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 LY6KQ17RY6 165 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 ZIK1Q3SY52 487 aaPredicted RBP4.14□□□□□ -1.75
HPS3-205ENST00000478525 AMOTQ4VCS5 1084 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 ZNF280BQ86YH2 543 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 ABRAQ8N0Z2 381 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 PRR18Q8N4B5 295 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 ADAMTS18Q8TE60 1221 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 PNISRQ8TF01 805 aaKnown RBP4.14□□□□□ -1.75
HPS3-205ENST00000478525 MOGAT1Q96PD6 335 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 SIGLEC11Q96RL6 698 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 SLC13A1Q9BZW2 595 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 XPR1Q9UBH6 696 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 ZMYM2Q9UBW7 1377 aa4.14□□□□□ -1.75
HPS3-205ENST00000478525 CYSRT1A8MQ03 144 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 BTBD19C9JJ37 291 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 H3BNX3 289 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 SMAD6O43541 496 aaKnown RBP4.13□□□□□ -1.75
HPS3-205ENST00000478525 KATNA1O75449 491 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 CLSTN1O94985 981 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 MYCLP12524 364 aaPredicted RBP4.13□□□□□ -1.75
HPS3-205ENST00000478525 LRPAP1P30533 357 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 NKX6-1P78426 367 aaPredicted RBP4.13□□□□□ -1.75
HPS3-205ENST00000478525 USP45Q70EL2 814 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 RBMXL3Q8N7X1 1067 aaKnown RBP4.13□□□□□ -1.75
HPS3-205ENST00000478525 ZNF548Q8NEK5 533 aaPredicted RBP4.13□□□□□ -1.75
HPS3-205ENST00000478525 MAP4K1Q92918 833 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 SLC35A4Q96G79 324 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 TMEM184CQ9NVA4 438 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 TFCP2L1Q9NZI6 479 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 HEY2Q9UBP5 337 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 SQORQ9Y6N5 450 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 TNKSO95271 1327 aa4.13□□□□□ -1.75
HPS3-205ENST00000478525 TTC3P53804 2025 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 H3BUI4 141 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 GTPBP1O00178 669 aaKnown RBP4.12□□□□□ -1.75
HPS3-205ENST00000478525 CRYABP02511 175 aaKnown RBP4.12□□□□□ -1.75
HPS3-205ENST00000478525 FGAP02671 866 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 UCP3P55916 312 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 SEC23BQ15437 767 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 SFTPA1Q8IWL2 248 aa4.12□□□□□ -1.75
HPS3-205ENST00000478525 IZUMO1Q8IYV9 350 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms