RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 SH3RF2Q8TEC5 729 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 PARD3BQ8TEW8 1205 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 OSCP1Q8WVF1 389 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 SPATA32Q96LK8 384 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 C8orf48Q96LL4 319 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 B3GNT5Q9BYG0 378 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 ZNF518BQ9C0D4 1074 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 ECT2Q9H8V3 914 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 DMAC2Q9NW81 257 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 USP25Q9UHP3 1055 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 F5P12259 2224 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 SPTBN4Q9H254 2564 aa14.29□□□□□ -0.12
APTX-221ENST00000477119 ZNF840PA6NDX5 716 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 LRRIQ3A6PVS8 624 aaPredicted RBP14.28□□□□□ -0.12
APTX-221ENST00000477119 CLDN5O00501 218 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 ATG13O75143 517 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 EGFP01133 1207 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 C4BPAP04003 597 aaKnown RBP14.28□□□□□ -0.12
APTX-221ENST00000477119 CNR2P34972 360 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 PDE6CP51160 858 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 AP3M2P53677 418 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 CACNA2D1P54289 1103 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 NOP14P78316 857 aaKnown RBP14.28□□□□□ -0.12
APTX-221ENST00000477119 CLDN10P78369 228 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 KRT85P78386 507 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 TCHHQ07283 1943 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 NCOA4Q13772 614 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 PUM1Q14671 1186 aaKnown RBP eCLIP14.28□□□□□ -0.12
APTX-221ENST00000477119 RSPO4Q2I0M5 234 aaPredicted RBP14.28□□□□□ -0.12
APTX-221ENST00000477119 ZNF699Q32M78 642 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 TDRD10Q5VZ19 366 aaKnown RBP14.28□□□□□ -0.12
APTX-221ENST00000477119 NAIF1Q69YI7 327 aaPredicted RBP14.28□□□□□ -0.12
APTX-221ENST00000477119 LAIR1Q6GTX8 287 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 DGLUCYQ7Z3D6 616 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 B3GALNT2Q8NCR0 500 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 ATP2A3Q93084 1043 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 ELMO3Q96BJ8 720 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 P2RY13Q9BPV8 354 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 TTLL2Q9BWV7 592 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 ELOVL4Q9GZR5 314 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 LINC00597Q9H2U6 94 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 KCTD10Q9H3F6 313 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 SMYD3Q9H7B4 428 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 USP18Q9UMW8 372 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 ARHGAP26Q9UNA1 814 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 ZDHHC9Q9Y397 364 aa14.28□□□□□ -0.12
APTX-221ENST00000477119 PDXKO00764 312 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 RNF40O75150 1001 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 NR3C1P04150 777 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 RPN1P04843 607 aaKnown RBP14.27□□□□□ -0.13
APTX-221ENST00000477119 DRD1P21728 446 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 TGM1P22735 817 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 HOXA6P31267 233 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 SYKP43405 635 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 RAP1GAPP47736 663 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 PPP3CCP48454 512 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 PXNP49023 591 aaPredicted RBP14.27□□□□□ -0.13
APTX-221ENST00000477119 DLG4P78352 724 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 SPEM2Q0P670 501 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 TAF10Q12962 218 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 USP4Q13107 963 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 NR1H3Q13133 447 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 EML3Q32P44 896 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 ZNF667Q5HYK9 610 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 CEP135Q66GS9 1140 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 SLC9A9Q8IVB4 645 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 EXOC4Q96A65 974 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 RNF38Q9H0F5 515 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 VRTNQ9H8Y1 702 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 PARD6AQ9NPB6 346 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 TMEM30AQ9NV96 361 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 DLL3Q9NYJ7 618 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 SLC8A2Q9UPR5 921 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 HPSEQ9Y251 543 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 GPR179Q6PRD1 2367 aa14.27□□□□□ -0.13
APTX-221ENST00000477119 NUP210Q8TEM1 1887 aaPredicted RBP14.27□□□□□ -0.13
APTX-221ENST00000477119 LEFTY2O00292 366 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 VNN1O95497 513 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 MYL1P05976 194 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 RETP07949 1114 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 PFKLP17858 780 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 NDUFA8P51970 172 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 ZXDBP98169 803 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 LMNB2Q03252 620 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 IFRD2Q12894 506 aaPredicted RBP14.26□□□□□ -0.13
APTX-221ENST00000477119 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 CEP68Q76N32 757 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 NUP93Q8N1F7 819 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 TMEM174Q8WUU8 243 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 CD101Q93033 1021 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 SLITRK1Q96PX8 696 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 KCNK16Q96T55 309 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 MED10Q9BTT4 135 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 SDCBP2Q9H190 292 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 POLR3BQ9NW08 1133 aaPredicted RBP14.26□□□□□ -0.13
APTX-221ENST00000477119 SMPD4Q9NXE4 827 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 OTOGLQ3ZCN5 2332 aa14.26□□□□□ -0.13
APTX-221ENST00000477119 PRR29P0C7W0 189 aa14.25□□□□□ -0.13
APTX-221ENST00000477119 TCF3P15923 654 aa14.25□□□□□ -0.13
APTX-221ENST00000477119 YWHAQP27348 245 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms