RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 TCF3P15923 654 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 SEC13P55735 322 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 NUCB2P80303 420 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 SHC2P98077 582 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 ZXDBP98169 803 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 USP39Q53GS9 565 aaKnown RBP16.7■□□□□ 0.26
SRRT-209ENST00000474896 C2orf27AQ580R0 203 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 FAM173BQ6P4H8 233 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 VSTM1Q6UX27 236 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 CCDC73Q6ZRK6 1079 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 LIMS2Q7Z4I7 341 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 TSTD1Q8NFU3 115 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 OR5B17Q8NGF7 314 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 CCDC26Q8TAB7 109 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 USP33Q8TEY7 942 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 KBTBD7Q8WVZ9 684 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 MYLPFQ96A32 169 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 SPATA17Q96L03 361 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 CRTAC1Q9NQ79 661 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 TRPM5Q9NZQ8 1165 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
SRRT-209ENST00000474896 ANTXRLA6NF34 631 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 ZNF233A6NK53 670 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 C4orf47A7E2U8 309 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 LEFTY2O00292 366 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 NFATC1O95644 943 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 TNNC2P02585 160 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 OPRD1P41143 372 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 STAT6P42226 847 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 PDE6CP51160 858 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 USP46P62068 366 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 CYP27A1Q02318 531 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 MAPRE1Q15691 268 aaKnown RBP16.69■□□□□ 0.26
SRRT-209ENST00000474896 DUOXA2Q1HG44 320 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 DENND5BQ6ZUT9 1274 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 CCDC33Q8N5R6 958 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 MMS19Q96T76 1030 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 EDEM2Q9BV94 578 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 TPSD1Q9BZJ3 242 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 MYO16Q9Y6X6 1858 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 PTPRJQ12913 1337 aa16.69■□□□□ 0.26
SRRT-209ENST00000474896 A0A087X0B3 334 aa16.68■□□□□ 0.26
SRRT-209ENST00000474896 KIAA0391O15091 583 aaKnown RBP16.68■□□□□ 0.26
SRRT-209ENST00000474896 WARSP23381 471 aaKnown RBP16.68■□□□□ 0.26
SRRT-209ENST00000474896 ANXA13P27216 316 aa16.68■□□□□ 0.26
SRRT-209ENST00000474896 SURF1Q15526 300 aa16.68■□□□□ 0.26
SRRT-209ENST00000474896 PSAPL1Q6NUJ1 521 aa16.68■□□□□ 0.26
SRRT-209ENST00000474896 CBWD2Q8IUF1 395 aa16.68■□□□□ 0.26
SRRT-209ENST00000474896 CCDC65Q8IXS2 484 aa16.68■□□□□ 0.26
SRRT-209ENST00000474896 ADGRG2Q8IZP9 1017 aa16.68■□□□□ 0.26
SRRT-209ENST00000474896 RNF38Q9H0F5 515 aa16.68■□□□□ 0.26
SRRT-209ENST00000474896 THADAQ6YHU6 1953 aa16.68■□□□□ 0.26
SRRT-209ENST00000474896 ZNF840PA6NDX5 716 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 ABL1P00519 1130 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 PFKLP17858 780 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 GNL1P36915 607 aaPredicted RBP16.67■□□□□ 0.26
SRRT-209ENST00000474896 GAB4Q2WGN9 574 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 PMS2CLQ68D20 193 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 ANO7Q6IWH7 933 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 FILIP1Q7Z7B0 1213 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 C11orf74Q86VG3 221 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 TTC30AQ86WT1 665 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 PDILTQ8N807 584 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 GLIS3Q8NEA6 775 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 MYCBPAPQ8TBZ2 947 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 PCED1BQ96HM7 432 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 CEP295NLQ96MC4 621 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 CHMP5Q9NZZ3 219 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 NUP205Q92621 2012 aa16.67■□□□□ 0.26
SRRT-209ENST00000474896 GIPC1O14908 333 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 TRIM66O15016 1216 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 KHNYNO15037 678 aaKnown RBP16.66■□□□□ 0.26
SRRT-209ENST00000474896 CST3P01034 146 aaPredicted RBP16.66■□□□□ 0.26
SRRT-209ENST00000474896 BCKDHBP21953 392 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 SLC6A11P48066 632 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 PPP3CCP48454 512 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 NOVA1P51513 510 aaKnown RBP16.66■□□□□ 0.26
SRRT-209ENST00000474896 SLC7A9P82251 487 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 SLC39A14Q15043 492 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 CRY1Q16526 586 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 FOXD4L6Q3SYB3 417 aaPredicted RBP16.66■□□□□ 0.26
SRRT-209ENST00000474896 MDH1BQ5I0G3 518 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 DAB2IPQ5VWQ8 1189 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 FOXD4L3Q6VB84 417 aaPredicted RBP16.66■□□□□ 0.26
SRRT-209ENST00000474896 STXBP4Q6ZWJ1 553 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 HS2ST1Q7LGA3 356 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 RASSF3Q86WH2 238 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 RDH13Q8NBN7 331 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 HPS3Q969F9 1004 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 MRPL45Q9BRJ2 306 aaKnown RBP16.66■□□□□ 0.26
SRRT-209ENST00000474896 TTLL2Q9BWV7 592 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 SNX25Q9H3E2 840 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 SMPD4Q9NXE4 827 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 HSPBP1Q9NZL4 362 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 EHD2Q9NZN4 543 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 MMP17Q9ULZ9 603 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 USP24Q9UPU5 2620 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 KIAA1549LQ6ZVL6 1849 aa16.66■□□□□ 0.26
SRRT-209ENST00000474896 LNP1A1A4G5 178 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms