RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 PCDHA12Q9UN75 941 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 AK5Q9Y6K8 562 aa13.63□□□□□ -0.23
HDAC6-217ENST00000469223 ITPR2Q14571 2701 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 A0A1B0GTW7 788 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 ARHGEF35A5YM69 484 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 MYMKA6NI61 221 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 MEI4A8MW99 385 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 NDUFS2O75306 463 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 DEXIO95424 95 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 SPATA31C1P0DKV0 1188 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 XRCC6P12956 609 aaKnown RBP eCLIP13.62□□□□□ -0.23
HDAC6-217ENST00000469223 C6P13671 934 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 HOXB2P14652 356 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 CYP11B2P19099 503 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 NDUFV2P19404 249 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 PROZP22891 400 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 SSRP1Q08945 709 aaKnown RBP13.62□□□□□ -0.23
HDAC6-217ENST00000469223 RESTQ13127 1097 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 PTPRNQ16849 979 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 WDR45BQ5MNZ6 344 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 C6orf118Q5T5N4 469 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 PRICKLE2Q7Z3G6 844 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 ARL14EPQ8N8R7 260 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-217ENST00000469223 SPPL2BQ8TCT7 592 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 SENP8Q96LD8 212 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 TRIM4Q9C037 500 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 TTC12Q9H892 705 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-217ENST00000469223 BSNQ9UPA5 3926 aa13.62□□□□□ -0.23
HDAC6-217ENST00000469223 C2orf78A6NCI8 922 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 BTBD18B2RXH4 712 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 SCAMP3O14828 347 aaKnown RBP13.61□□□□□ -0.23
HDAC6-217ENST00000469223 MED24O75448 989 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 CSH1P0DML2 217 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 CSH2P0DML3 217 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 KRT10P13645 584 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 WASP42768 502 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 CSRP3P50461 194 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 BNC1Q01954 994 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 KCNB1Q14721 858 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 NOLC1Q14978 699 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC6-217ENST00000469223 RABEP1Q15276 862 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 CALCRLQ16602 461 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 HLA-BQ31612 363 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 PREPLQ4J6C6 727 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-217ENST00000469223 EARS2Q5JPH6 523 aaKnown RBP13.61□□□□□ -0.23
HDAC6-217ENST00000469223 COLEC12Q5KU26 742 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 TAS1R3Q7RTX0 852 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 SPACA3Q8IXA5 215 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 OXER1Q8TDS5 423 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 C2orf15Q8WU43 125 aaKnown RBP13.61□□□□□ -0.23
HDAC6-217ENST00000469223 ZNF419Q96HQ0 510 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-217ENST00000469223 ZBTB45Q96K62 511 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-217ENST00000469223 MIR1-1HGQ9H1L0 117 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 NUMA1Q14980 2115 aa13.61□□□□□ -0.23
HDAC6-217ENST00000469223 CCDC169A6NNP5 214 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 TNFSF14O43557 240 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 ZNF217O75362 1048 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 PSMA5P28066 241 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 TXKP42681 527 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 RHDQ02161 417 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 BLOC1S2Q6QNY1 142 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 FILIP1Q7Z7B0 1213 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 LRRTM3Q86VH5 581 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 FBXL16Q8N461 479 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 ZNF513Q8N8E2 541 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-217ENST00000469223 FOXJ1Q92949 421 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 WBP1Q96G27 269 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 SLC6A17Q9H1V8 727 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 GMIPQ9P107 970 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 GCNT4Q9P109 453 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 UXTQ9UBK9 157 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-217ENST00000469223 UBQLN1Q9UMX0 589 aaKnown RBP13.6□□□□□ -0.23
HDAC6-217ENST00000469223 ARHGAP26Q9UNA1 814 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 PCDHGB2Q9Y5G2 931 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 NBASA2RRP1 2371 aa13.6□□□□□ -0.23
HDAC6-217ENST00000469223 TCF3P15923 654 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 HNF1BP35680 557 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 EIF2DP41214 584 aaKnown RBP13.59□□□□□ -0.23
HDAC6-217ENST00000469223 GRIA2P42262 883 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 LILRA4P59901 499 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 DHCR24Q15392 516 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 TRMT11Q7Z4G4 463 aaKnown RBP13.59□□□□□ -0.23
HDAC6-217ENST00000469223 TMPRSS12Q86WS5 348 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 CATSPER3Q86XQ3 398 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 HSCBQ8IWL3 235 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 FAM177A1Q8N128 213 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-217ENST00000469223 KIFAP3Q92845 792 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 DRC1Q96MC2 740 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 JAKMIP1Q96N16 626 aaKnown RBP13.59□□□□□ -0.23
HDAC6-217ENST00000469223 SNX14Q9Y5W7 946 aa13.59□□□□□ -0.23
HDAC6-217ENST00000469223 LRBAP50851 2863 aa13.58□□□□□ -0.23
HDAC6-217ENST00000469223 A0A1W2PQF6 199 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 LEFTY2O00292 366 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 NOL4O94818 638 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 CYP11A1P05108 521 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 CYP3A5P20815 502 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 PDIA3P30101 505 aaKnown RBP13.58□□□□□ -0.24
HDAC6-217ENST00000469223 TNFRSF4P43489 277 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 NPTX2P47972 431 aa13.58□□□□□ -0.24
HDAC6-217ENST00000469223 ZXDBP98169 803 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms