RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 SGK1O00141 431 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 LEFTY2O00292 366 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 NFATC1O95644 943 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 ITGB3P05106 788 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 HDCP19113 662 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 HOXD12P35452 270 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 DDIT3P35638 169 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 RING1Q06587 406 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 LMAN2Q12907 356 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 NR1H3Q13133 447 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 POSTNQ15063 836 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 RHBDF2Q6PJF5 856 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 SYT12Q8IV01 421 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 DNAJC19Q96DA6 116 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 RNF38Q9H0F5 515 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 CD248Q9HCU0 757 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 TRPC7Q9HCX4 862 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 CRTAC1Q9NQ79 661 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 ITGA11Q9UKX5 1188 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 HCN2Q9UL51 889 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 AGAP1Q9UPQ3 857 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 ANAPC1Q9H1A4 1944 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 ASH1LQ9NR48 2969 aaKnown RBP13.07□□□□□ -0.32
UBR4-211ENST00000467272 EIF5BO60841 1220 aaKnown RBP13.06□□□□□ -0.32
UBR4-211ENST00000467272 HUS1O60921 280 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 ATP2C2O75185 946 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 OAS1P00973 400 aaKnown RBP13.06□□□□□ -0.32
UBR4-211ENST00000467272 LMO2P25791 158 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 LONP1P36776 959 aaKnown RBP13.06□□□□□ -0.32
UBR4-211ENST00000467272 UBA7P41226 1012 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 SLC6A11P48066 632 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 LHX1P48742 406 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 MYL7Q01449 175 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 ACAP1Q15027 740 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 DHCR24Q15392 516 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 TRIM61Q5EBN2 209 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 VSTM1Q6UX27 236 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 DPH6Q7L8W6 267 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 C12orf40Q86WS4 652 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 CCDC33Q8N5R6 958 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 ALLCQ8N6M5 410 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 RLN3Q8WXF3 142 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 POMGNT1Q8WZA1 660 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 LARP4BQ92615 738 aaKnown RBP13.06□□□□□ -0.32
UBR4-211ENST00000467272 PIGKQ92643 395 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 CALML4Q96GE6 196 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 DUSP9Q99956 384 aaKnown RBP13.06□□□□□ -0.32
UBR4-211ENST00000467272 FAM213AQ9BRX8 229 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 CAPN10Q9HC96 672 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 TMEM30AQ9NV96 361 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 KLK13Q9UKR3 277 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 NME7Q9Y5B8 376 aa13.06□□□□□ -0.32
UBR4-211ENST00000467272 PLXND1Q9Y4D7 1925 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 BPTFQ12830 3046 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 FRMD3A2A2Y4 597 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 HYAL3O43820 417 aaPredicted RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 TBCAO75347 108 aaKnown RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 ENGP17813 658 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 GARTP22102 1010 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 PCSK1P29120 753 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 DHPSP49366 369 aaPredicted RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 PDE6CP51160 858 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 SEC13P55735 322 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 NOP14P78316 857 aaKnown RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 TFAMQ00059 246 aaKnown RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 PSMD2Q13200 908 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 DHX8Q14562 1220 aaKnown RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 KCNB1Q14721 858 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 L1TD1Q5T7N2 865 aaKnown RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 USP49Q70CQ1 688 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 LPCAT2Q7L5N7 544 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 FILIP1Q7Z7B0 1213 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 SFR1Q86XK3 245 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 SPATA2LQ8IUW3 424 aaPredicted RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 ETFBKMTQ8IXQ9 262 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 ADGRF2Q8IZF7 708 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 FSIP1Q8NA03 581 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 TXNDC5Q8NBS9 432 aaKnown RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 ZCCHC14Q8WYQ9 949 aaKnown RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 ZFRQ96KR1 1074 aaKnown RBP13.05□□□□□ -0.32
UBR4-211ENST00000467272 SEL1LQ9UBV2 794 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 SNX9Q9Y5X1 595 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 PTPRJQ12913 1337 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 PCDH15Q96QU1 1955 aa13.05□□□□□ -0.32
UBR4-211ENST00000467272 GON4LQ3T8J9 2241 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 GJB3O75712 270 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 KAT7O95251 611 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 DPP6P42658 865 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 TNFRSF4P43489 277 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 PPP3CCP48454 512 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 CASP5P51878 434 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 FAM193AP78312 1265 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 RBP5P82980 135 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 EMC10Q5UCC4 262 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 RAB44Q7Z6P3 723 aaPredicted RBP13.04□□□□□ -0.32
UBR4-211ENST00000467272 TMEFF1Q8IYR6 380 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 CSGALNACT2Q8N6G5 542 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 KCNV2Q8TDN2 545 aa13.04□□□□□ -0.32
UBR4-211ENST00000467272 WHAMMQ8TF30 809 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms