RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 RECQL4O94761 1208 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 DARSP14868 501 aaKnown RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 PDGFRAP16234 1089 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 CDR1P51861 262 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 ZNF143P52747 638 aaPredicted RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 TAZQ16635 292 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 CDO1Q16878 200 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 MORN1Q5T089 497 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 NOTUMQ6P988 496 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 BBS12Q6ZW61 710 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 CYP4X1Q8N118 509 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 CMASQ8NFW8 434 aaPredicted RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 CCHCR1Q8TD31 782 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 ATXN2LQ8WWM7 1075 aaKnown RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 CALN1Q9BXU9 219 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 RRAGCQ9HB90 399 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 SAYSD1Q9NPB0 183 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 GEMIN8Q9NWZ8 242 aaKnown RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 KLK14Q9P0G3 267 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 KIAA1257Q9ULG3 409 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 SMIM35A0A1B0GVV1 85 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 MBLAC1A4D2B0 266 aaPredicted RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 C2CD4BA6NLJ0 364 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 TREHO43280 583 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 ZNF865P0CJ78 1059 aaPredicted RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 YARSP54577 528 aaKnown RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 BEX3Q00994 111 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 MAP2K5Q13163 448 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 MMRN1Q13201 1228 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 MFSD10Q14728 455 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 FASTKD3Q14CZ7 662 aaKnown RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 CST9Q5W186 159 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 CYP4V2Q6ZWL3 525 aaPredicted RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 RELL1Q8IUW5 271 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 TAB3Q8N5C8 712 aaPredicted RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 PPM1EQ8WY54 764 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 ARHGEF2Q92974 986 aaKnown RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 CENPTQ96BT3 561 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 NCAPGQ9BPX3 1015 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 TRIM6Q9C030 488 aaPredicted RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 STMN4Q9H169 189 aaPredicted RBP11.99□□□□□ -0.49
HPS1-208ENST00000467246 ASNSD1Q9NWL6 643 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 SLC5A4Q9NY91 659 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 TBK1Q9UHD2 729 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 EFR3BQ9Y2G0 817 aa11.99□□□□□ -0.49
HPS1-208ENST00000467246 IGF2BP3O00425 579 aaKnown RBP eCLIP11.98□□□□□ -0.49
HPS1-208ENST00000467246 GABBR2O75899 941 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 GPD1P21695 349 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 FAM182AQ5T1J6 154 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 RNASEH2BQ5TBB1 312 aaKnown RBP11.98□□□□□ -0.49
HPS1-208ENST00000467246 ALKAL1Q6UXT8 129 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 TADA2BQ86TJ2 420 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 RFX6Q8HWS3 928 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 SCUBE3Q8IX30 993 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 CNPY3Q9BT09 278 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 RNF39Q9H2S5 420 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 DPEP3Q9H4B8 488 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 INTS9Q9NV88 658 aaKnown RBP11.98□□□□□ -0.49
HPS1-208ENST00000467246 DDX20Q9UHI6 824 aaKnown RBP11.98□□□□□ -0.49
HPS1-208ENST00000467246 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.98□□□□□ -0.49
HPS1-208ENST00000467246 GOLGA8MH3BSY2 632 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 NRLP54845 237 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 ATP11AP98196 1134 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 GAD2Q05329 585 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 ACAP1Q15027 740 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 SOWAHAQ2M3V2 549 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 PKDCCQ504Y2 493 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 C9orf57Q5W0N0 161 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 TTC39CQ8N584 583 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 OR6B3Q8NGW1 331 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 CFAP57Q96MR6 1250 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 MYCBPQ99417 103 aaPredicted RBP11.98□□□□□ -0.49
HPS1-208ENST00000467246 PRMT1Q99873 361 aaKnown RBP11.98□□□□□ -0.49
HPS1-208ENST00000467246 B3GNT5Q9BYG0 378 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 PCDH9Q9HC56 1237 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.98□□□□□ -0.49
HPS1-208ENST00000467246 PIN4Q9Y237 131 aaKnown RBP11.98□□□□□ -0.49
HPS1-208ENST00000467246 DERAQ9Y315 318 aa11.98□□□□□ -0.49
HPS1-208ENST00000467246 ADAM17P78536 824 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 MORF4L2Q15014 288 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 SNX17Q15036 470 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 CCDC14Q49A88 953 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 NPNTQ6UXI9 565 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 TAOK1Q7L7X3 1001 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 SESTD1Q86VW0 696 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 BEST2Q8NFU1 509 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 KHSRPQ92945 711 aaKnown RBP eCLIP11.97□□□□□ -0.49
HPS1-208ENST00000467246 NAALADL1Q9UQQ1 740 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 BANF1O75531 89 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 TCEA3O75764 348 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 MYL3P08590 195 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 CYP2B6P20813 491 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 DRD4P21917 467 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 PCK1P35558 622 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 IFNAR2P48551 515 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 PSEN2P49810 448 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 CDH6P55285 790 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 HUNKP57058 714 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 CDC42EP1Q00587 391 aa11.97□□□□□ -0.49
HPS1-208ENST00000467246 OLFML1Q6UWY5 402 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms