RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CGB2Q6NT52 195 aa19.6■□□□□ 0.73
TSPAN4-210ENST00000464987 FAM183BPQ6ZVS7 135 aa19.6■□□□□ 0.73
TSPAN4-210ENST00000464987 TGS1Q96RS0 853 aaKnown RBP19.6■□□□□ 0.73
TSPAN4-210ENST00000464987 TUT1Q9H6E5 874 aaKnown RBP19.6■□□□□ 0.73
TSPAN4-210ENST00000464987 BARX2Q9UMQ3 279 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-210ENST00000464987 SHOC2Q9UQ13 582 aa19.6■□□□□ 0.73
TSPAN4-210ENST00000464987 GINS2Q9Y248 185 aa19.6■□□□□ 0.73
TSPAN4-210ENST00000464987 EFR3BQ9Y2G0 817 aa19.6■□□□□ 0.73
TSPAN4-210ENST00000464987 NME7Q9Y5B8 376 aa19.6■□□□□ 0.73
TSPAN4-210ENST00000464987 CLUHO75153 1309 aa19.6■□□□□ 0.73
TSPAN4-210ENST00000464987 RASSF9O75901 435 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 TMEM63AO94886 807 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 SNAI1O95863 264 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 FOXN2P32314 431 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 SNAPC2Q13487 334 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 SYCP2LQ5T4T6 812 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 PAXIP1Q6ZW49 1069 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 CENPUQ71F23 418 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 NAT8LQ8N9F0 302 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 FAM71DQ8N9W8 422 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 GPRC5AQ8NFJ5 357 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 KIF12Q96FN5 646 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 ACAP3Q96P50 834 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 NSRP1Q9H0G5 558 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 CYP3A43Q9HB55 503 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.59■□□□□ 0.735e-7■■■■□ 26.7
TSPAN4-210ENST00000464987 RNF8O76064 485 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 HMGCRP04035 888 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 INCA1Q0VD86 236 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 HIF1AQ16665 826 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 OR6B2Q6IFH4 312 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 TRPM8Q7Z2W7 1104 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 C4orf33Q8N1A6 199 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 RXFP2Q8WXD0 754 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 RSAD2Q8WXG1 361 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 TTC25Q96NG3 672 aa19.59■□□□□ 0.73
TSPAN4-210ENST00000464987 A0A1B0GUA9 196 aa19.58■□□□□ 0.73
TSPAN4-210ENST00000464987 EIF3EP60228 445 aaKnown RBP19.58■□□□□ 0.73
TSPAN4-210ENST00000464987 KIZQ2M2Z5 673 aa19.58■□□□□ 0.73
TSPAN4-210ENST00000464987 FAM133BQ5BKY9 247 aaKnown RBP19.58■□□□□ 0.73
TSPAN4-210ENST00000464987 ZMAT2Q96NC0 199 aaKnown RBP19.58■□□□□ 0.73
TSPAN4-210ENST00000464987 PAIP2Q9BPZ3 127 aaKnown RBP19.58■□□□□ 0.73
TSPAN4-210ENST00000464987 LPIN3Q9BQK8 851 aa19.58■□□□□ 0.73
TSPAN4-210ENST00000464987 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.58■□□□□ 0.73
TSPAN4-210ENST00000464987 A0A1W2PPM1 405 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 C2CD4BA6NLJ0 364 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 ADCY6O43306 1168 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 RBP3P10745 1247 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 GHRP10912 638 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 ZNF143P52747 638 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 GRIK4Q16099 956 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 LDLRAD1Q5T700 205 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 PPP1R26Q5T8A7 1209 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 ARHGEF18Q6ZSZ5 1173 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 CEP128Q6ZU80 1094 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 ZC3H18Q86VM9 953 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 PPIL6Q8IXY8 311 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 RIBC1Q8N443 379 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 FAXDC2Q96IV6 333 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 MRPL45Q9BRJ2 306 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 VTA1Q9NP79 307 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 UBN1Q9NPG3 1134 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 GRID1Q9ULK0 1009 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 USP15Q9Y4E8 981 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 HES2Q9Y543 173 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 ACTL7BQ9Y614 415 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 DOCK3Q8IZD9 2030 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 TRIP12Q14669 1992 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 LOC102724159A0A0B4J2E5 919 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 APOC4-APOC2K7ER74 178 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 PDHXO00330 501 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 ECM2O94769 699 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 APOC2P02655 101 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 P4HA1P13674 534 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 PDGFRAP16234 1089 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 GPD1P21695 349 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 CDH6P55285 790 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 RBP5P82980 135 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 ATP11AP98196 1134 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 PWP2Q15269 919 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 PMF1Q6P1K2 205 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 USP50Q70EL3 339 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 TTC13Q8NBP0 860 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 SPATA18Q8TC71 538 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 SPOCK2Q92563 424 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 ZNF408Q9H9D4 720 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 ASNSD1Q9NWL6 643 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 NKIRAS1Q9NYS0 192 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 ITGA11Q9UKX5 1188 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 C2CD2Q9Y426 696 aa19.57■□□□□ 0.72
TSPAN4-210ENST00000464987 FAM47DPA6NHR8 397 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 HCRTO43612 131 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 SMPD1P17405 629 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 KRT15P19012 456 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 TAC1P20366 129 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 GOLGA7BQ2TAP0 167 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 LCLAT1Q6UWP7 414 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 TDRPQ86YL5 185 aa19.56■□□□□ 0.72
TSPAN4-210ENST00000464987 LRRN4Q8WUT4 740 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms