RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 KCNB1Q14721 858 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 TMEM196Q5HYL7 178 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 FSTL4Q6MZW2 842 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 SH3RF2Q8TEC5 729 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 OSCP1Q8WVF1 389 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 SECISBP2LQ93073 1101 aaKnown RBP20.09■□□□□ 0.81
SF3A1-205ENST00000463818 ELMO3Q96BJ8 720 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 CHFRQ96EP1 664 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 TTLL2Q9BWV7 592 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 ZNF518BQ9C0D4 1074 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 SMYD3Q9H7B4 428 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 ECT2Q9H8V3 914 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 VRTNQ9H8Y1 702 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 EHD2Q9NZN4 543 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 WDR87Q6ZQQ6 2873 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 PATJQ8NI35 1801 aa20.09■□□□□ 0.81
SF3A1-205ENST00000463818 FAM237AA0A1B0GTK4 181 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 CLDN5O00501 218 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 CLSTN1O94985 981 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 VNN1O95497 513 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 CACNA2D1P54289 1103 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 DLG4P78352 724 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 ZNF699Q32M78 642 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 ZNF667Q5HYK9 610 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 HEATR6Q6AI08 1181 aaKnown RBP20.08■□□□□ 0.81
SF3A1-205ENST00000463818 B3GALNT2Q8NCR0 500 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 RMDN1Q96DB5 314 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 LINC00597Q9H2U6 94 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 FBRSL1Q9HCM7 1045 aaKnown RBP20.08■□□□□ 0.81
SF3A1-205ENST00000463818 TMEM30AQ9NV96 361 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 ARHGAP26Q9UNA1 814 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 WNT6Q9Y6F9 365 aa20.08■□□□□ 0.81
SF3A1-205ENST00000463818 ZNF292O60281 2723 aa20.08■□□□□ 0.8
SF3A1-205ENST00000463818 NUP210Q8TEM1 1887 aaPredicted RBP20.07■□□□□ 0.8
SF3A1-205ENST00000463818 ZNF840PA6NDX5 716 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 HRO43593 1189 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 PRR29P0C7W0 189 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 HOXC13P31276 330 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 GJA4P35212 333 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 RAP1GAPP47736 663 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 PPP3CCP48454 512 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 IFNAR2P48551 515 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 PDE6CP51160 858 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 NOP14P78316 857 aaKnown RBP20.07■□□□□ 0.8
SF3A1-205ENST00000463818 TAF10Q12962 218 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 USP4Q13107 963 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 LPAL2Q16609 132 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 LONP2Q86WA8 852 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 CPA6Q8N4T0 437 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 TMC2Q8TDI7 906 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 CCDC47Q96A33 483 aaKnown RBP20.07■□□□□ 0.8
SF3A1-205ENST00000463818 ELOVL4Q9GZR5 314 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 RAB23Q9ULC3 237 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 ATP6V1DQ9Y5K8 247 aa20.07■□□□□ 0.8
SF3A1-205ENST00000463818 CALUO43852 315 aaPredicted RBP20.06■□□□□ 0.8
SF3A1-205ENST00000463818 ABL1P00519 1130 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 EGFP01133 1207 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 TCF3P15923 654 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 PFKLP17858 780 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 ZXDBP98169 803 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 SGSM1Q2NKQ1 1148 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 EML3Q32P44 896 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 CEP135Q66GS9 1140 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 NAIF1Q69YI7 327 aaPredicted RBP20.06■□□□□ 0.8
SF3A1-205ENST00000463818 PKN3Q6P5Z2 889 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 SCARA5Q6ZMJ2 495 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 PRR23BQ6ZRT6 265 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 GPR161Q8N6U8 529 aaKnown RBP20.06■□□□□ 0.8
SF3A1-205ENST00000463818 ATP2A3Q93084 1043 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 P2RY13Q9BPV8 354 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 SCAND2PQ9GZW5 306 aaPredicted RBP20.06■□□□□ 0.8
SF3A1-205ENST00000463818 RNF38Q9H0F5 515 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 SDCBP2Q9H190 292 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 GMEB2Q9UKD1 530 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 TRAF3IP3Q9Y228 551 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 FRMD4BQ9Y2L6 1034 aa20.06■□□□□ 0.8
SF3A1-205ENST00000463818 A0A1W2PQ27 194 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 A0A1W2PQ64 194 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 A0A1W2PQD8 194 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 IKBKBO14920 756 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 RHOBTB3O94955 611 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 KIF20AO95235 890 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 DRD1P21728 446 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 HOXA6P31267 233 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 FOXK2Q01167 660 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 DPYDQ12882 1025 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 NR1H3Q13133 447 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 SRSF5Q13243 272 aaKnown RBP20.05■□□□□ 0.8
SF3A1-205ENST00000463818 SIM2Q14190 667 aaPredicted RBP20.05■□□□□ 0.8
SF3A1-205ENST00000463818 ZACNQ401N2 412 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 KRBA2Q6ZNG9 492 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 PAQR9Q6ZVX9 377 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 SV2AQ7L0J3 742 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 NUP93Q8N1F7 819 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 EXOC4Q96A65 974 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 KCNK16Q96T55 309 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 MED10Q9BTT4 135 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 MAPK8IP1Q9UQF2 711 aa20.05■□□□□ 0.8
SF3A1-205ENST00000463818 LEFTY2O00292 366 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 ATG13O75143 517 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms