RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 REC8O95072 547 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 CA3P07451 260 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 PFKMP08237 780 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 C1SP09871 688 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 AKR1B1P15121 316 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 COPB2P35606 906 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 PLS1Q14651 629 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 SBK1Q52WX2 424 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 CASC1Q6TDU7 716 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 TICAM2Q86XR7 235 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 NXPE1Q8N323 547 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 D2HGDHQ8N465 521 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 IL17DQ8TAD2 202 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 STAG1Q8WVM7 1258 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 CHMP4CQ96CF2 233 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ZNF503Q96F45 646 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 JAKMIP1Q96N16 626 aaKnown RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 TTC14Q96N46 770 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 PLEKHG4BQ96PX9 1271 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ELF4Q99607 663 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 TRPV6Q9H1D0 765 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ABHD16BQ9H3Z7 469 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 VCPKMTQ9H867 229 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 IL17RBQ9NRM6 502 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ATP8A2Q9NTI2 1148 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 SAE1Q9UBE0 346 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ANAPC4Q9UJX5 808 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 CTDP1Q9Y5B0 961 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 WDFY4Q6ZS81 3184 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 MYH1P12882 1939 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 CBX4O00257 560 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ATP2A1O14983 1001 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 WDR46O15213 610 aaKnown RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 APOL3O95236 402 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 CASTP20810 708 aaKnown RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ADCY7P51828 1080 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 HMGA2P52926 109 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 CCL23P55773 120 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ROM1Q03395 351 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ITGA7Q13683 1181 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 TOB2Q14106 344 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ZNF174Q15697 407 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 RRP12Q5JTH9 1297 aaKnown RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 UNQ6494/PRO21346Q6UXR6 183 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 TMEM179Q6ZVK1 233 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 C16orf86Q6ZW13 317 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ANKRD53Q8N9V6 530 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 OR5AN1Q8NGI8 311 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 C16orf92Q96LL3 132 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 CERS4Q9HA82 394 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 SPC25Q9HBM1 224 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ACSS2Q9NR19 701 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 FBXO28Q9NVF7 368 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ARPP21Q9UBL0 812 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 B4GALT6Q9UBX8 382 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 DNAI1Q9UI46 699 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 RIPK3Q9Y572 518 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 GREB1LQ9C091 1923 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-204ENST00000463622 ASTN1O14525 1302 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 A0A1W2PRX2 142 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 ZNF213O14771 459 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 DCXO43602 365 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 KPNA6O60684 536 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 GNAT2P19087 354 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 RXRAP19793 462 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 RPS6KB1P23443 525 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 FNTBP49356 437 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 AK2P54819 239 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 EXOSC10Q01780 885 aaKnown RBP4.16□□□□□ -1.74
SCFD1-204ENST00000463622 MYBPC3Q14896 1274 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 SLC35G1Q2M3R5 365 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 TTC38Q5R3I4 469 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 ESRP1Q6NXG1 681 aaKnown RBP4.16□□□□□ -1.74
SCFD1-204ENST00000463622 GIMAP6Q6P9H5 292 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 KLHDC10Q6PID8 442 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 CXCL17Q6UXB2 119 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 UBE2R2Q712K3 238 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-204ENST00000463622 RUFY3Q7L099 469 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 HERC6Q8IVU3 1022 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 SPICE1Q8N0Z3 855 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 ARNTL2Q8WYA1 636 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 CCDC17Q96LX7 622 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 DRC1Q96MC2 740 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 UIMC1Q96RL1 719 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 GPHA2Q96T91 129 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 MYL10Q9BUA6 226 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 UBE2ZQ9H832 354 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-204ENST00000463622 TMEM260Q9NX78 707 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 ZHX1Q9UKY1 873 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-204ENST00000463622 TPCN1Q9ULQ1 816 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 Q9Y3F1 56 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 SH3BP1Q9Y3L3 701 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 SMCHD1A6NHR9 2005 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 TCF20Q9UGU0 1960 aaKnown RBP4.16□□□□□ -1.74
SCFD1-204ENST00000463622 ZNF236Q9UL36 1845 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 CFAP54Q96N23 3096 aa4.16□□□□□ -1.74
SCFD1-204ENST00000463622 IGKV6D-41A0A0C4DH26 115 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 CAPN14A8MX76 684 aa4.15□□□□□ -1.74
SCFD1-204ENST00000463622 KIF28PB7ZC32 967 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms