RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 DDX53Q86TM3 631 aaKnown RBP18.39■□□□□ 0.53
CHRD-208ENST00000460627 KIRREL3Q8IZU9 778 aa18.39■□□□□ 0.53
CHRD-208ENST00000460627 EMC1Q8N766 993 aa18.39■□□□□ 0.53
CHRD-208ENST00000460627 IPMKQ8NFU5 416 aa18.39■□□□□ 0.53
CHRD-208ENST00000460627 GAD1Q99259 594 aa18.39■□□□□ 0.53
CHRD-208ENST00000460627 USH1CQ9Y6N9 552 aa18.39■□□□□ 0.53
CHRD-208ENST00000460627 TISP43B9A030 160 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 DDX3XO00571 662 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHRD-208ENST00000460627 CASQ2O14958 399 aaPredicted RBP18.38■□□□□ 0.53
CHRD-208ENST00000460627 BMP6P22004 513 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 ETFBP38117 255 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 CDH18Q13634 790 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 KCNT1Q5JUK3 1230 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 NOL9Q5SY16 702 aaKnown RBP18.38■□□□□ 0.53
CHRD-208ENST00000460627 TMC7Q7Z402 723 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 UNC93AQ86WB7 457 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 PPTC7Q8NI37 304 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 CDT1Q9H211 546 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 TMEM88BA6NKF7 163 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 ATP5HO75947 161 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 NCKAP1LP55160 1127 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 C3orf62Q6ZUJ4 267 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 KIAA0319LQ8IZA0 1049 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 USP13Q92995 863 aaPredicted RBP18.38■□□□□ 0.53
CHRD-208ENST00000460627 ELOVL4Q9GZR5 314 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 CDY2AQ9Y6F7 541 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 CASZ1Q86V15 1759 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 FKTNO75072 461 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 NDUFS3O75489 264 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 PAX3P23760 479 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 EPHB3P54753 998 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 GYS2P54840 703 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 MRPS6P82932 125 aaKnown RBP18.38■□□□□ 0.53
CHRD-208ENST00000460627 TMTC4Q5T4D3 741 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 TTC30AQ86WT1 665 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 DDX42Q86XP3 938 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHRD-208ENST00000460627 SMARCD1Q96GM5 515 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 ARHGEF38Q9NXL2 777 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 WNT7AO00755 349 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 TWF1Q12792 350 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 MTA1Q13330 715 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 SYCP2LQ5T4T6 812 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 SPRYD7Q5W111 196 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 SPOCD1Q6ZMY3 1216 aa18.38■□□□□ 0.53
CHRD-208ENST00000460627 CDK5RAP1Q96SZ6 601 aaKnown RBP18.38■□□□□ 0.53
CHRD-208ENST00000460627 TIGD7Q6NT04 549 aaPredicted RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 MSL3Q8N5Y2 521 aaKnown RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 SPATA20Q8TB22 786 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 HNRNPLLQ8WVV9 542 aaKnown RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 SGSM3Q96HU1 749 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 ACO2Q99798 780 aaKnown RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 HAUS8Q9BT25 410 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 NAT9Q9BTE0 207 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 DMAP1Q9NPF5 467 aaPredicted RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 TIMM13Q9Y5L4 95 aaPredicted RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 COL1A2P08123 1366 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 LTBP3Q9NS15 1303 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 DNAJC6O75061 913 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 GEMP55040 296 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 BTG3Q14201 252 aaPredicted RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 CCNG2Q16589 344 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 KIF19Q2TAC6 998 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 RNF135Q8IUD6 432 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 CCNJLQ8IV13 435 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 C12orf56Q8IXR9 622 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 CDH8P55286 799 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 YWHAZP63104 245 aaKnown RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 ARHGEF7Q14155 803 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 TERF2Q15554 542 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 PCSK7Q16549 785 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 AGBL2Q5U5Z8 902 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 CDC26Q8NHZ8 85 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 MTMR8Q96EF0 704 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 SNRPAP09012 282 aaKnown RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 ARFIP2P53365 341 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 OTUD4Q01804 1114 aaKnown RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 BEND6Q5SZJ8 279 aaPredicted RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.37■□□□□ 0.53
CHRD-208ENST00000460627 ENTPD7Q9NQZ7 604 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 C2CD2Q9Y426 696 aa18.37■□□□□ 0.53
CHRD-208ENST00000460627 H0Y626 953 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 MBL2P11226 248 aaPredicted RBP18.36■□□□□ 0.53
CHRD-208ENST00000460627 PRKAR2AP13861 404 aaKnown RBP18.36■□□□□ 0.53
CHRD-208ENST00000460627 SMAD1Q15797 465 aaKnown RBP18.36■□□□□ 0.53
CHRD-208ENST00000460627 ATXN7L3BQ96GX2 97 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 RRP15Q9Y3B9 282 aaKnown RBP18.36■□□□□ 0.53
CHRD-208ENST00000460627 SPECC1L-ADORA2AF8WAN1 911 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 SPAG7O75391 227 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 FLT3LGP49771 235 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 ACAP1Q15027 740 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 UGCGQ16739 394 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 FAM171A1Q5VUB5 890 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 ITIH5Q86UX2 942 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 STAMBPL1Q96FJ0 436 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 SLC12A8A0AV02 714 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 KIF3CO14782 793 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 NCAM2O15394 837 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 PJA2O43164 708 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 ADRB2P07550 413 aa18.36■□□□□ 0.53
CHRD-208ENST00000460627 ICAM3P32942 547 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms