RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 AP1G2O75843 785 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 LSM8O95777 96 aaKnown RBP12.25□□□□□ -0.45
SCN9A-204ENST00000452182 GLP2RO95838 553 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 HNRNPA1P09651 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
SCN9A-204ENST00000452182 SPATA31D3P0C874 917 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 ANXA13P27216 316 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 CDH5P33151 784 aaPredicted RBP12.25□□□□□ -0.45
SCN9A-204ENST00000452182 GTF2F1P35269 517 aaKnown RBP eCLIP12.25□□□□□ -0.45
SCN9A-204ENST00000452182 GRIK1P39086 918 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 GPD2P43304 727 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 ALDH1A3P47895 512 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 CACNA2D1P54289 1103 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 FMO1Q01740 532 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 ADAM15Q13444 863 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 TRIM72Q6ZMU5 477 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 SPATA31D4Q6ZUB0 917 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 TTC9BQ8N6N2 239 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 ZMIZ2Q8NF64 920 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 CMASQ8NFW8 434 aaPredicted RBP12.25□□□□□ -0.45
SCN9A-204ENST00000452182 VN1R2Q8NFZ6 395 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 SLC7A14Q8TBB6 771 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 STK32AQ8WU08 396 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 SLC20A1Q8WUM9 679 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 SLC35F5Q8WV83 523 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 PDLIM2Q96JY6 352 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 PANX2Q96RD6 677 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 SEPT5Q99719 369 aaPredicted RBP12.25□□□□□ -0.45
SCN9A-204ENST00000452182 SMOQ99835 787 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 AGPAT1Q99943 283 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 HAUS4Q9H6D7 363 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 YIPF1Q9Y548 306 aa12.25□□□□□ -0.45
SCN9A-204ENST00000452182 F8VP50 259 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 M0QYV0 167 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 XPO1O14980 1071 aaKnown RBP12.24□□□□□ -0.45
SCN9A-204ENST00000452182 BEST1O76090 585 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 MMEP08473 750 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 CFHP08603 1231 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 FOSL2P15408 326 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 CHRNB2P17787 502 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 ATF6P18850 670 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 FECHP22830 423 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 PLA2G4AP47712 749 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 GSDMDP57764 484 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 PDE4CQ08493 712 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 PPM1LQ5SGD2 360 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 SPC24Q8NBT2 197 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 KCTD13Q8WZ19 329 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 KCNK16Q96T55 309 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 IGFLR1Q9H665 355 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 SFXN1Q9H9B4 322 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 CYLDQ9NQC7 956 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 ASB3Q9Y575 518 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 CEP83Q9Y592 693 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 GREB1Q4ZG55 1949 aa12.24□□□□□ -0.45
SCN9A-204ENST00000452182 SSU72P8A0A1W2PR75 194 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 HHLA1C9JL84 531 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 TNFRSF10BO14763 440 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 LRG1P02750 347 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 CYP1A1P04798 512 aaPredicted RBP12.23□□□□□ -0.45
SCN9A-204ENST00000452182 HOXB8P17481 243 aaPredicted RBP12.23□□□□□ -0.45
SCN9A-204ENST00000452182 RPL34P49207 117 aaKnown RBP12.23□□□□□ -0.45
SCN9A-204ENST00000452182 CDR1P51861 262 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 EPHB3P54753 998 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 MAP3K7CLP57077 242 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 GOLGA8FQ08AF8 430 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 GOLGA8DPQ0D2H9 430 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 TWF1Q12792 350 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 DDR2Q16832 855 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 TDRD12Q587J7 1177 aaKnown RBP12.23□□□□□ -0.45
SCN9A-204ENST00000452182 TAF3Q5VWG9 929 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 LLGL2Q6P1M3 1020 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 DENND1BQ6P3S1 775 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 CYP26C1Q6V0L0 522 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 ZNF571Q7Z3V5 609 aaPredicted RBP12.23□□□□□ -0.45
SCN9A-204ENST00000452182 VPS36Q86VN1 386 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 SCN4BQ8IWT1 228 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 WDTC1Q8N5D0 677 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 OLIG1Q8TAK6 271 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 UBA3Q8TBC4 463 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 SECISBP2LQ93073 1101 aaKnown RBP12.23□□□□□ -0.45
SCN9A-204ENST00000452182 PABPC5Q96DU9 382 aaKnown RBP12.23□□□□□ -0.45
SCN9A-204ENST00000452182 HSFY1Q96LI6 401 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 PDCL3Q9H2J4 239 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 COMMD8Q9NX08 183 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 EHD2Q9NZN4 543 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 ARHGAP20Q9P2F6 1191 aa12.23□□□□□ -0.45
SCN9A-204ENST00000452182 SOAT2O75908 522 aa12.22□□□□□ -0.45
SCN9A-204ENST00000452182 SKILP12757 684 aa12.22□□□□□ -0.45
SCN9A-204ENST00000452182 UNGP13051 313 aaPredicted RBP12.22□□□□□ -0.45
SCN9A-204ENST00000452182 RBM10P98175 930 aaKnown RBP12.22□□□□□ -0.45
SCN9A-204ENST00000452182 VEPH1Q14D04 833 aa12.22□□□□□ -0.45
SCN9A-204ENST00000452182 RAB41Q5JT25 222 aa12.22□□□□□ -0.45
SCN9A-204ENST00000452182 PPP1R2P3Q6NXS1 205 aa12.22□□□□□ -0.45
SCN9A-204ENST00000452182 ANKRD54Q6NXT1 300 aa12.22□□□□□ -0.45
SCN9A-204ENST00000452182 DENND5BQ6ZUT9 1274 aa12.22□□□□□ -0.45
SCN9A-204ENST00000452182 ITIH5Q86UX2 942 aa12.22□□□□□ -0.45
SCN9A-204ENST00000452182 PIGZQ86VD9 579 aa12.22□□□□□ -0.45
SCN9A-204ENST00000452182 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
SCN9A-204ENST00000452182 NUP93Q8N1F7 819 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms