RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 C15orf59Q2T9L4 293 aaPredicted RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 CTU1Q7Z7A3 348 aaKnown RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.95□□□□□ -1.3
USP46-202ENST00000451218 MTG1Q9BT17 334 aaPredicted RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 GCOM2Q9BZD3 368 aaPredicted RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 SEPT11Q9NVA2 429 aaKnown RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 SAE1Q9UBE0 346 aaPredicted RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 ADAM21Q9UKJ8 722 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 DNPEPQ9ULA0 475 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 MFHAS1Q9Y4C4 1052 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 ZNF623O75123 536 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 CHRNA3P32297 505 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 CLCNKBP51801 687 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 DR1Q01658 176 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 SEMA3BQ13214 749 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 CUL1Q13616 776 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 DPYSL3Q14195 570 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 ZNF667Q5HYK9 610 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 CLLU1OSQ5K130 101 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 SPDYCQ5MJ68 293 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 SPOCD1Q6ZMY3 1216 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 SND1Q7KZF4 910 aaKnown RBP eCLIP6.94□□□□□ -1.3
USP46-202ENST00000451218 NKD2Q969F2 451 aaPredicted RBP6.94□□□□□ -1.3
USP46-202ENST00000451218 CSNK1G1Q9HCP0 422 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 PSD3Q9NYI0 1048 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 HESX1Q9UBX0 185 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 IGLV3-25P01717 112 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 TNNC2P02585 160 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 TMOD1P28289 359 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 ZNF143P52747 638 aaPredicted RBP6.94□□□□□ -1.3
USP46-202ENST00000451218 FAM189BP81408 668 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 RBP5P82980 135 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 DSC1Q08554 894 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 PPP2R5EQ16537 467 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 FAM171BQ6P995 826 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 ZNF534Q76KX8 674 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 ALLCQ8N6M5 410 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 STK32AQ8WU08 396 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 RTP4Q96DX8 246 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 TRIM11Q96F44 468 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 USP29Q9HBJ7 922 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 TMBIM4Q9HC24 238 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 TMPRSS4Q9NRS4 437 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 FAM105AQ9NUU6 356 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 NOTCH4Q99466 2003 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 TCRBV7S3A2A0A539 114 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 FAM187AA6NFU0 413 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 M0QZQ0 153 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 ZSCAN5DPP0CG00 497 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 YWHAEP62258 255 aaKnown RBP6.94□□□□□ -1.3
USP46-202ENST00000451218 GABPB1Q06547 395 aaPredicted RBP6.94□□□□□ -1.3
USP46-202ENST00000451218 NFX1Q12986 1120 aaKnown RBP6.94□□□□□ -1.3
USP46-202ENST00000451218 MMRN1Q13201 1228 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 CLEC20AQ6ZU45 233 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 ACOT1Q86TX2 421 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 LRRTM3Q86VH5 581 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 MZB1Q8WU39 189 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 NDRG1Q92597 394 aaKnown RBP6.94□□□□□ -1.3
USP46-202ENST00000451218 CFAP57Q96MR6 1250 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 TMEM209Q96SK2 561 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 RHOBTB2Q9BYZ6 727 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 SRRDQ9UH36 339 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 PIN4Q9Y237 131 aaKnown RBP6.94□□□□□ -1.3
USP46-202ENST00000451218 TRPV2Q9Y5S1 764 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 KPNA7A9QM74 516 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 PI4K2BG5E9Z4 385 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 CYP11A1P05108 521 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 MIPP30301 263 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 MLH1P40692 756 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 GOLGA7BQ2TAP0 167 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 MSS51Q4VC12 460 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 SLC9A4Q6AI14 798 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 CAGE1Q8TC20 777 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 SLC2A13Q96QE2 648 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 TSPAN18Q96SJ8 248 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 SMOQ99835 787 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 TCHPQ9BT92 498 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 C10orf88Q9H8K7 445 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 UBN1Q9NPG3 1134 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 PRDM10Q9NQV6 1147 aa6.94□□□□□ -1.3
USP46-202ENST00000451218 ZMYND8Q9ULU4 1186 aaPredicted RBP6.94□□□□□ -1.3
USP46-202ENST00000451218 RPS6KA5O75582 802 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 CALB1P05937 261 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 KDELR1P24390 212 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 NAP1L1P55209 391 aaKnown RBP6.93□□□□□ -1.3
USP46-202ENST00000451218 SKOR1P84550 965 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 BYSLQ13895 437 aaKnown RBP6.93□□□□□ -1.3
USP46-202ENST00000451218 CCNG2Q16589 344 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 KCNT1Q5JUK3 1230 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 FOXR1Q6PIV2 292 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 HFE2Q6ZVN8 426 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 UNC93AQ86WB7 457 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 SH2D3CQ8N5H7 860 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 OR10T2Q8NGX3 314 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 WDR6Q9NNW5 1121 aaKnown RBP6.93□□□□□ -1.3
USP46-202ENST00000451218 IP6K2Q9UHH9 426 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 SCINQ9Y6U3 715 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 PIK3R2O00459 728 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 CLDN5O00501 218 aa6.93□□□□□ -1.3
USP46-202ENST00000451218 NBNO60934 754 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms