RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 EGFP01133 1207 aa19.41■□□□□ 0.7
COL9A1-205ENST00000447041 TGM1P22735 817 aa19.41■□□□□ 0.7
COL9A1-205ENST00000447041 GJA4P35212 333 aa19.41■□□□□ 0.7
COL9A1-205ENST00000447041 GRSF1Q12849 480 aaKnown RBP eCLIP19.41■□□□□ 0.7
COL9A1-205ENST00000447041 RSPO4Q2I0M5 234 aaPredicted RBP19.41■□□□□ 0.7
COL9A1-205ENST00000447041 TDRD10Q5VZ19 366 aaKnown RBP19.41■□□□□ 0.7
COL9A1-205ENST00000447041 SH3RF2Q8TEC5 729 aa19.41■□□□□ 0.7
COL9A1-205ENST00000447041 SMYD3Q9H7B4 428 aa19.41■□□□□ 0.7
COL9A1-205ENST00000447041 ECT2Q9H8V3 914 aa19.41■□□□□ 0.7
COL9A1-205ENST00000447041 FBRSL1Q9HCM7 1045 aaKnown RBP19.41■□□□□ 0.7
COL9A1-205ENST00000447041 DUS2Q9NX74 493 aaKnown RBP19.41■□□□□ 0.7
COL9A1-205ENST00000447041 DLL3Q9NYJ7 618 aa19.41■□□□□ 0.7
COL9A1-205ENST00000447041 USP18Q9UMW8 372 aa19.41■□□□□ 0.7
COL9A1-205ENST00000447041 KIAA1549LQ6ZVL6 1849 aa19.41■□□□□ 0.7
COL9A1-205ENST00000447041 MYO16Q9Y6X6 1858 aa19.41■□□□□ 0.7
COL9A1-205ENST00000447041 A8MXQ7 604 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 CLDN5O00501 218 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 RNF40O75150 1001 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 PHACTR2O75167 634 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 CLSTN1O94985 981 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 PTPN1P18031 435 aaKnown RBP19.4■□□□□ 0.7
COL9A1-205ENST00000447041 ATICP31939 592 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 RAP1GAPP47736 663 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 IFNAR2P48551 515 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 ZXDBP98169 803 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 BIRC3Q13489 604 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 SIM2Q14190 667 aaPredicted RBP19.4■□□□□ 0.7
COL9A1-205ENST00000447041 PUM1Q14671 1186 aaKnown RBP eCLIP19.4■□□□□ 0.7
COL9A1-205ENST00000447041 EML3Q32P44 896 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 LAIR1Q6GTX8 287 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 DGLUCYQ7Z3D6 616 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 CPA6Q8N4T0 437 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 B3GALNT2Q8NCR0 500 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 GOLGA5Q8TBA6 731 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 PARD3BQ8TEW8 1205 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 SYAP1Q96A49 352 aaPredicted RBP19.4■□□□□ 0.7
COL9A1-205ENST00000447041 C8orf48Q96LL4 319 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 CEP295NLQ96MC4 621 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 TTLL2Q9BWV7 592 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 ZNF518BQ9C0D4 1074 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 POLR3BQ9NW08 1133 aaPredicted RBP19.4■□□□□ 0.7
COL9A1-205ENST00000447041 ARHGAP26Q9UNA1 814 aa19.4■□□□□ 0.7
COL9A1-205ENST00000447041 FAM163BP0C2L3 166 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 HDCP19113 662 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 PXNP49023 591 aaPredicted RBP19.39■□□□□ 0.69
COL9A1-205ENST00000447041 GALK1P51570 392 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 CDH8P55286 799 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 NOP14P78316 857 aaKnown RBP19.39■□□□□ 0.69
COL9A1-205ENST00000447041 SPEM2Q0P670 501 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 ZNF699Q32M78 642 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 SCARA5Q6ZMJ2 495 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 GPR161Q8N6U8 529 aaKnown RBP19.39■□□□□ 0.69
COL9A1-205ENST00000447041 ATP2A3Q93084 1043 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 P2RY13Q9BPV8 354 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 B3GNT5Q9BYG0 378 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 ELOVL4Q9GZR5 314 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 KCTD10Q9H3F6 313 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 VRTNQ9H8Y1 702 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 DMAC2Q9NW81 257 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 TRPM5Q9NZQ8 1165 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 HPSEQ9Y251 543 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 ZDHHC9Q9Y397 364 aa19.39■□□□□ 0.69
COL9A1-205ENST00000447041 VNN1O95497 513 aa19.38■□□□□ 0.69
COL9A1-205ENST00000447041 C4BPAP04003 597 aaKnown RBP19.38■□□□□ 0.69
COL9A1-205ENST00000447041 TCF3P15923 654 aa19.38■□□□□ 0.69
COL9A1-205ENST00000447041 CMA1P23946 247 aa19.38■□□□□ 0.69
COL9A1-205ENST00000447041 DLG4P78352 724 aa19.38■□□□□ 0.69
COL9A1-205ENST00000447041 CLDN10P78369 228 aa19.38■□□□□ 0.69
COL9A1-205ENST00000447041 AMPD2Q01433 879 aa19.38■□□□□ 0.69
COL9A1-205ENST00000447041 IFRD2Q12894 506 aaPredicted RBP19.38■□□□□ 0.69
COL9A1-205ENST00000447041 NCOA4Q13772 614 aa19.38■□□□□ 0.69
COL9A1-205ENST00000447041 WDR5BQ86VZ2 330 aa19.38■□□□□ 0.69
COL9A1-205ENST00000447041 EZH1Q92800 747 aaPredicted RBP19.38■□□□□ 0.69
COL9A1-205ENST00000447041 SPATA32Q96LK8 384 aa19.38■□□□□ 0.69
COL9A1-205ENST00000447041 MED19A0JLT2 244 aaPredicted RBP19.37■□□□□ 0.69
COL9A1-205ENST00000447041 ZNF840PA6NDX5 716 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 LEFTY2O00292 366 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 PRR29P0C7W0 189 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 DRD1P21728 446 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 HOXA6P31267 233 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 CNR2P34972 360 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 LMNB2Q03252 620 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 TAF10Q12962 218 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 PSMD2Q13200 908 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 ZNF667Q5HYK9 610 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.37■□□□□ 0.69
COL9A1-205ENST00000447041 SLC9A9Q8IVB4 645 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 CD101Q93033 1021 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 RNF38Q9H0F5 515 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 SDCBP2Q9H190 292 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 LINC00597Q9H2U6 94 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 EHD2Q9NZN4 543 aa19.37■□□□□ 0.69
COL9A1-205ENST00000447041 CACNA1AO00555 2505 aa19.36■□□□□ 0.69
COL9A1-205ENST00000447041 ATG2BQ96BY7 2078 aa19.36■□□□□ 0.69
COL9A1-205ENST00000447041 EML5Q05BV3 1969 aa19.36■□□□□ 0.69
COL9A1-205ENST00000447041 OLFM2O95897 454 aa19.36■□□□□ 0.69
COL9A1-205ENST00000447041 ABL1P00519 1130 aa19.36■□□□□ 0.69
COL9A1-205ENST00000447041 NR3C1P04150 777 aa19.36■□□□□ 0.69
COL9A1-205ENST00000447041 RETP07949 1114 aa19.36■□□□□ 0.69
COL9A1-205ENST00000447041 PDE6CP51160 858 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms